Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00412 ATGAAGGCTTTGAGTTTGAGTGCCATAAACTCTTCAAATCCATGTCTTCCCAAAACCCATTTGCTCAAAGTCCCTATCTTTCACCCCTTCTTCAAATTCAAGCCATTCTCATACTCACACAGCGCCCTTCATGGCCATGGTGCAAAGAGAGCTCACACTTTTCCTTTCACCATCAGCTGCAAGCTGGAAAGCTCTCAAGATAAGAAAAACAAAGGGAAGAGTGTTTCACAGAAGATTGGAGGGCTTTCTGGGGTGGCCAATATGCTGAGAAGGAAGACTTTGCAGATTCTCTCTAATTTGCCATTGGCTATTGGGGAAATGTTTGCTGTTGCTTCTTTGATGGCTTTGGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACTTACACAACTCAACTCCCCCTCATCAAGGTTTCAAGAAGATGGTCATTTTTGCACTCTGCTGAGGCCATACGTAAGCAGGAATTTTCAGAATCGTTGCCCAGACCATCAATCCAAGATGTTAGTACTATATTGATGGGAGCTGGATACGAGGTTGTATTCTTGAAAGGACCATCTTTATATGCTTTTCAAGGACTTGCTGGTCGTCTGGCCCCTGttggagtccatatagcattgctactgataatggctggagGAACTCTTAGTGCTTGTGGGAGCTTCAGAGGTTCAGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTATATGATGTTCTGGCTCCTTCTGGCTTTCTATCCTCTCCAACCGATGCTTTTAATACAGAGATTCATGTCAACAAATTCTACATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCCACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAACAGATTGGAGTATTTCCGCTCTGCAAATTCTTAAGGACAATGAAGGACCTTATAACTTAGCTATGGCACCTCTACAGATCAATGGAGATAAGAAACTTTTTGGTACTTATCTACCGGCTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGAAAATTTGCAGGAGTTACATGGCCAAAGTCAGAGCTCCCAATCAATATTGATGGTTCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGGCTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGTTATTTGTCTCATTCACAGATTTGGGCTTTACAAGACGGCACAGCAGTCTTCATTGGAGTGAAGACTAACAGAGCAAAGATGGAATTTCCAGAGGAGATGAACCGTTTACTTGATAAGGTCCCTGAAATAGTTGAGTCAAGTCTACCTAAGCAAGCTGATAGCATTAGTGGTTAG 1413 0.4218 MKALSLSAINSSNPCLPKTHLLKVPIFHPFFKFKPFSYSHSALHGHGAKRAHTFPFTISCKLESSQDKKNKGKSVSQKIGGLSGVANMLRRKTLQILSNLPLAIGEMFAVASLMALVLALLGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPRPSIQDVSTILMGAGYEVVFLKGPSLYAFQGLAGRLAPVGVHIALLLIMAGGTLSACGSFRGSVTVPQGLNFVVYDVLAPSGFLSSPTDAFNTEIHVNKFYMDYYESGEVSQFHTDLSLRNMDGKETDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTYLPAGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVTWPKSELPINIDGSEIVIVDAIGSSGLDLKADPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTAVFIGVKTNRAKMEFPEEMNRLLDKVPEIVESSLPKQADSISG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00412 470 Pfam ResB-like family 116 286 IPR007816 -
Gma12g00412 470 Pfam ResB-like family 334 446 IPR007816 -
Gma12g00412 470 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 116 460 IPR023494 -
Gma12g00412 470 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 76 116 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00412 Gma-Chr12 3390168 3394466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00412 26 460 Miscellaneous Gene Families AT1G49380 55.204 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00412 K07399 - gmx:100807003 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00412 12 3390168 3394466 Gma12g00412 12 3390168 3394466 ECH
Gma12g00412 12 3390168 3394466 Gma11g01106 11 9344639 9349793 GST