Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01106 ATGAAGGCTTTGAGTTTGAGTGCCATAAACACCTCAAATCCATGTCTTCCCCAAACCCATTTCCTCAAAGTCCCTATCTTTCACCCCTTCTTCAGATTCAAGCCATTCTCAAATTCAAGCCATGGTGCAAAGAGAGCTCACACTCTTCCACTCACCATCAGCTGCAAGCTGAAAAACTCTCAAGAAATGAAAAACAAAGGGAAGAGTGTGTCACAGAAGATTGTGTTATCAGAGGCTTCCCCTCCACCACTCACAGAGGATGATAAGAACAATGGTGATAGCAAGGATGTTCCAGAGAGCTCAAAGAAGAAGGGAGGGCTTTCTGGGGTGGCCAATATGTTGAGAAGGAAGACTTTGCAGATTCTCTCTAATTTGCCATTGGCTATTGGGGAAATGTTTGCTGTTGCTTCTTTAATGGCTTTAGGCACATTTATTGATCAAGGTGAAGCCCCTGACTTTTATTTCCAGAAATACCCTGAAGATCATCCCGTGTTTGGATTTTTTACTTGGAGATGGGTTCTCACCCTTGGTTTTGATCACATGTTTACATCCCCTATATTTCTTGGAGTGTTGGCTCTCCTTGGTGCATCCCTCATGGCCTGCACTTACACAACTCAACTCCCCCTCATCAAGGTTTCAAGAAGATGGTCATTTTTGCACTCTGCTGAGGCCATACGTAAGCAAGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATATTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCTTTTCAAGGGCTTGCGGGTCGGCTGGCCCCTGttggagtccatatagcattgctactgataatggctggagGAACTCTTAGTGCTACTGGGAGCTTCAGAGGTTCAGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTTCTGGCTCCTTTTGGCTTTCTGTCCTCTCCAACCGATGCTTTTAATACAGAGATTCATGTCAACAAATTCTCCATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCCACACCGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAGACAATCAGTGTAAATGATCCTTTAAGATACGGTGGTATCACCATATATCAGACAGATTGGAGTATTTCCGCTCTGCAAATTCTTAAGGATAATGAAGGACCTTATAACTTAGCTATGGCACCTCTACAGATAAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTGCAGTCAATTGTCCTTTATGACAAGGAAGGAAAATTTGCAGGAGTTAGACGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGAATTGAAGACTGATCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGGACAACAGTCTTCGTTGGAGGGAAGACTAACAGGGCAAAGATGGAATTTCCAGAGGAGATGAGCCGCTTACTTGATAAGGTCCCTGAAATAGTTGAATCAAATCTACCTAAGCATGCTGATAGCATTAGTGGTTAG 1692 0.4184 MKALSLSAINTSNPCLPQTHFLKVPIFHPFFRFKPFSNSSHGAKRAHTLPLTISCKLKNSQEMKNKGKSVSQKIVLSEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVANMLRRKTLQILSNLPLAIGEMFAVASLMALGTFIDQGEAPDFYFQKYPEDHPVFGFFTWRWVLTLGFDHMFTSPIFLGVLALLGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFQGLAGRLAPVGVHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLAPFGFLSSPTDAFNTEIHVNKFSMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLELKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKMEFPEEMSRLLDKVPEIVESNLPKHADSISG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01106 563 MobiDBLite consensus disorder prediction 62 107 - -
Gma11g01106 563 Pfam ResB-like family 427 539 IPR007816 -
Gma11g01106 563 Pfam ResB-like family 127 391 IPR007816 -
Gma11g01106 563 MobiDBLite consensus disorder prediction 62 78 - -
Gma11g01106 563 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 81 552 IPR023494 -
Gma11g01106 563 MobiDBLite consensus disorder prediction 88 102 - -
Gma11g01106 563 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 115 544 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01106 Gma-Chr11 9344639 9349793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01106 26 553 Miscellaneous Gene Families AT1G49380 69.418 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01106 K07399 - gmx:100807003 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01106 11 9344639 9349793 Gma11g01106 11 9344639 9349793 ECH
Gma12g00412 12 3390168 3394466 Gma11g01106 11 9344639 9349793 GST