Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00393 ATGGACGAGAAGCTCATACAGCGGTTAGAATCGGCGGTGTTGCGCTTGGAGTCGCTATCCTCCGGACTCCACCCCTCCGCTTCACAATCCGGCGGCGCCCACGCTCCCGATGCGGCGCTCGATCCCTCCGTCGTCGCCTTCGCCGATCTGATCGACCAGTACGTCGGTAGGGTTTCCGGCGCTGCAGAGGTTATCGGCGGACAGGTCTTGGGTGTCACCAAGCTGGTGCAGGAAGCTTTCAATGTTCAGAAAGAGCTTTTGATTAAGCTCAAACAGACTCAGAAGCCTAACCTCGCTGGGTTGTCTGAATTTCTGAAACCATTGAATGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTGGAGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGCCAAAGCTCTCAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTTCAACAGGAAAAATAATTGCTCCATCAAAAGCTTCTGCTCCTGCTGCCCCTCCCCCTCCACCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCAGGAAACGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGGGCTATTGAAAAAGAAACTCCTGCAAGTTCACGTGTGTTTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGCCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTCATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTCTAGGTAGCAAGGTCAACAATATAACAATTGACAAATGCACAAAGATTGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAACGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCTTTAGAAGCATCCATAAGTACAGCAAAGTCAAGCGAGATCAATGTATTGGTTCCTGGTGCTGATCCTGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGAGCACTTTGAAACAACTCCTGCTGCTCATTCTGGAGGTTAA 1413 0.4501 MDEKLIQRLESAVLRLESLSSGLHPSASQSGGAHAPDAALDPSVVAFADLIDQYVGRVSGAAEVIGGQVLGVTKLVQEAFNVQKELLIKLKQTQKPNLAGLSEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSSTGKIIAPSKASAPAAPPPPPASLFSSESSQASSSKPKEGMSAVFQQISSGNVTSGLKKVTNDMKTKNRTDRTGVVGAIEKETPASSRVFSKAGPPKFELQMGRKWVVENQIEKKDLVIEDCDSKQSVYIYGCKNSVLQILGSKVNNITIDKCTKIGVVFKDVVAACEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLEASISTAKSSEINVLVPGADPDGDWVEHSLPQQYIHLFKNEHFETTPAAHSGG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00393 470 MobiDBLite consensus disorder prediction 223 255 - -
Gma12g00393 470 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 469 IPR001837 GO:0003779|GO:0007010
Gma12g00393 470 ProSiteProfiles C-CAP/cofactor C-like domain profile. 309 447 IPR017901 -
Gma12g00393 470 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 309 469 IPR036223 -
Gma12g00393 470 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 469 - -
Gma12g00393 470 Pfam Adenylate cyclase associated (CAP) N terminal 3 57 IPR013992 GO:0003779|GO:0007010
Gma12g00393 470 MobiDBLite consensus disorder prediction 239 255 - -
Gma12g00393 470 Pfam Adenylate cyclase associated (CAP) C terminal 309 467 IPR013912 GO:0003779|GO:0007010
Gma12g00393 470 Gene3D - 308 469 IPR016098 -
Gma12g00393 470 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Gma12g00393 470 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 43 235 IPR036222 -
Gma12g00393 470 SMART carp 347 385 IPR006599 -
Gma12g00393 470 SMART carp 386 423 IPR006599 -
Gma12g00393 470 Gene3D - 43 218 IPR036222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00393 Gma-Chr12 3207572 3212308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00393 K17261 - gmx:100780824 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00393 12 3207572 3212308 Gma12g00393 12 3207572 3212308 ECH
Gma12g00393 12 3207572 3212308 Gma11g01080 11 9117348 9122599 GST