Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01080 ATGGACGAGAAGCTCATACAGCGCTTAGAATCTGCGGTGTCGCGCTTGGAGTCGCTATCCGCCGGATTCCACCCCTCCGCCACACAATCCGGCGGCGCCGACGCTCCCGATGCGGCGCTCGATCCCTCCATCGTCGCCTTCGCCGATCTGATCGACCAGTACGTCGGTAGGGTTTCCGGCGCTGCCGAGGTTATCGGTGGTCAAGTCTTGGATGTCACCAAACTGGTGCAGGAAGCTTTCAATGTTCAGAAAGAGCTTCTGATTAAGCTCAGACAGACTCAGAAGCCTAACCTTGCTGGGTTGTCTGAATTTCTGAAACCATTGAACGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGATAGTCTCTCGGCTTTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGATCCAAATCATGTTGAGTGGGCCAAAGCTCTTAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAATATTTGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTCCCCCTCCATCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCTGGAAATGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGTGCTATTGAAAAAGAAACTCCGGCAAGTTCACGCGTGTTTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTGATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTTCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCCTTAGAAGCATCCATAACTACAGCAAAGTCAAGCGAGATCAATGTAATGGTTCCTGGTGCTGATCCGGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGGGCACTTTGAAACGACACCTGCTGCTCATTCTGGAGGTTAA 1410 0.4482 MDEKLIQRLESAVSRLESLSAGFHPSATQSGGADAPDAALDPSIVAFADLIDQYVGRVSGAAEVIGGQVLDVTKLVQEAFNVQKELLIKLRQTQKPNLAGLSEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKIFAPSKASAPAAPPPPSASLFSSESSQASSSKPKEGMSAVFQQISSGNVTSGLKKVTNDMKTKNRTDRTGVVGAIEKETPASSRVFSKAGPPKFELQMGRKWVVENQIEKKDLVIEDCDSKQSVYIYGCKNSVLQISGKVNNITIDKCTKMGVVFKDVVAACEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLEASITTAKSSEINVMVPGADPDGDWVEHSLPQQYIHLFKNGHFETTPAAHSGG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01080 469 SMART carp 385 422 IPR006599 -
Gma11g01080 469 SMART carp 347 384 IPR006599 -
Gma11g01080 469 Gene3D - 43 218 IPR036222 -
Gma11g01080 469 Pfam Adenylate cyclase associated (CAP) C terminal 309 466 IPR013912 GO:0003779|GO:0007010
Gma11g01080 469 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 468 IPR001837 GO:0003779|GO:0007010
Gma11g01080 469 Gene3D - 308 468 IPR016098 -
Gma11g01080 469 MobiDBLite consensus disorder prediction 222 255 - -
Gma11g01080 469 Pfam Adenylate cyclase associated (CAP) N terminal 3 57 IPR013992 GO:0003779|GO:0007010
Gma11g01080 469 MobiDBLite consensus disorder prediction 236 255 - -
Gma11g01080 469 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 43 234 IPR036222 -
Gma11g01080 469 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Gma11g01080 469 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 309 468 IPR036223 -
Gma11g01080 469 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 468 - -
Gma11g01080 469 ProSiteProfiles C-CAP/cofactor C-like domain profile. 309 446 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01080 Gma-Chr11 9117348 9122599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01080 K17261 - gmx:100793194 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01080 11 9117348 9122599 Gma11g01080 11 9117348 9122599 ECH
Gma12g00393 12 3207572 3212308 Gma11g01080 11 9117348 9122599 GST