Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00364 ATGTGTGACACTATGTCTATGTCGTCCGTACCTATTGCAGATCATCGACCTGTTAAAGATGATGGAATACTAGAGGATGATAAGAAAACAAAGCTTGGTTCTTTAAAGAAGGTAGCAATCAGTGCATCTTCAAAGTTCAAGCATTCCTTGCAAAAGAAGGGGAGAAGGCATAGCAGGGTTTTGGCTGTTGCTATTGAGGATGATGTTGATGCAGAACAGTTGCAAGTAGTTGATGCTTTTCGCCAAGCACTTATCTTGGAAGAGCTATTACCTGCAAAACATGATGATCATCATAAGATGTTAAGTTTGACATTAACAAAACAAAAACAAATGTGGGCAGATATGCTTCAGTGGAGGAGGGAGTTTGGTGCTGACACCATCATGGAGGATTTTGAATTCAAGGAGATAGATGAAGTTCAAAAATACTACTCGCAAGGGCATCAAGGAGTTGATAAGGAAGGGCGACCTGTTTACATTGAAAAGCTGGGTCAGGTTGACTCTAACAAGCTGATGCAAGTAACAACTATGGATCGCTATCTTAAGTACCCAGTTGGAGAGTTTGAGAAGACATTCGTTGTTAAGTTCCCTGCCTGTTCAATTGCAGCAAAGAAGCACATTGACCAAAGCACAACTATCTTGGATGTGCAAGGAGTGGGTCTCAGAAGTTTGAACAAAGCAGCAAGGGATCTCATCCAGCGTCTTCAGAAGATTGATGGTGACAACTACCCTGAGTCCTTGAACAGTATGTTCATCATCAATGCTGGTTCTGGATTTAGAATGTTGTGGAACAATTTCTGCTTTATTGACCAGGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGTACCTGTGCAGACAAAGGTGGCTGTATGCTCTCAGACAAGGGACCATGGAATGACACTGAAATCATGAAGATGGTTCAAAATGGCGAAGGAAAATGCAAGAGGAAAACCTTATCCGGGATTGAAGAGAAAACAATCATTCAAGATGAAACAGCATGCCAAAAGGTACCTAGTTATCTACTTTACAGTTTCAAGTTCAGTCTTGTCACCTTTGTCCCAGTGATTGACAAGCAAGTTAATGCATCTTGGGAAAAAGCGGTACAAAATAATCAGTTTGCAGTTTCTAAAGCTGCAGATTGTTTCCCTTGCGATGCTTCCAAGACTTTAAACGGGTTAAGAATTCCATTTACTGGTGTAATCATGGCCATTCTTATGGGAGTGATAACGATGATCCGCATGACACGGAACATGCCAGGGAAAGTCACTGAAGCTGCCATGTATGGTAACCCAATATATCGTTATGTTAACATGATGAAAGCACCTGCCAATTCCATGGATGATCAAATGTGCCTGATGAAGCACATGGCTGAGCTAGAAGAGAAGGTGAATGTCCTTTCTATGAAACCTGCCATGTCACCTGAGATGGAAGAATTGCTGAATAATGCTCTTAACAGAGCCAGCAGGCTCGAACAAGAGTTGGATACTACCAAAAAGTCACTTGATGATGCCCTTGCTCGAGAAGTGGAGCTTCAAGCTCACCTTGACAAAAAGAAAAAGAAGAAATTGTTCTGCTGGTAA 1626 0.4176 MCDTMSMSSVPIADHRPVKDDGILEDDKKTKLGSLKKVAISASSKFKHSLQKKGRRHSRVLAVAIEDDVDAEQLQVVDAFRQALILEELLPAKHDDHHKMLSLTLTKQKQMWADMLQWRREFGADTIMEDFEFKEIDEVQKYYSQGHQGVDKEGRPVYIEKLGQVDSNKLMQVTTMDRYLKYPVGEFEKTFVVKFPACSIAAKKHIDQSTTILDVQGVGLRSLNKAARDLIQRLQKIDGDNYPESLNSMFIINAGSGFRMLWNNFCFIDQVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDTEIMKMVQNGEGKCKRKTLSGIEEKTIIQDETACQKVPSYLLYSFKFSLVTFVPVIDKQVNASWEKAVQNNQFAVSKAADCFPCDASKTLNGLRIPFTGVIMAILMGVITMIRMTRNMPGKVTEAAMYGNPIYRYVNMMKAPANSMDDQMCLMKHMAELEEKVNVLSMKPAMSPEMEELLNNALNRASRLEQELDTTKKSLDDALAREVELQAHLDKKKKKKLFCW 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00364 541 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 135 301 IPR001251 -
Gma12g00364 541 SUPERFAMILY CRAL/TRIO domain 135 323 IPR036865 -
Gma12g00364 541 Coils Coil 220 240 - -
Gma12g00364 541 CDD SEC14 136 296 IPR001251 -
Gma12g00364 541 Pfam CRAL/TRIO domain 141 295 IPR001251 -
Gma12g00364 541 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 15 538 - -
Gma12g00364 541 MobiDBLite consensus disorder prediction 1 21 - -
Gma12g00364 541 Gene3D - 123 327 IPR036865 -
Gma12g00364 541 SMART sec14_4 135 298 IPR001251 -
Gma12g00364 541 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 15 538 - -
Gma12g00364 541 Coils Coil 488 536 - -
Gma12g00364 541 SUPERFAMILY CRAL/TRIO N-terminal domain 67 131 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00364 Gma-Chr12 3019141 3023271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00364 105 292 Acyl Lipid Metabolism Gene Families AT5G47730 26.733 1.77e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00364 - - gmx:100792335 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00364 12 3019141 3023271 Gma11g01050 11 8923108 8927130 GST