Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01050 ATGTGTGACACTATGTCTATGTCGTCCGCACCTATTACAGATCATCGACCTGTTAAAGGTGGTCTTGAGATGGAATATGTAGAGGATGATAAGAAAAAAAAGCTTGGCTCTTTAAAGAAGGTAGCAATCAGTGCATCTTCAAAGTTCAGGCATTCCTTGCAAATGAAGGGGAGAAGGCATAGCAGGGTTGTGTCTGTTGCTATTGAGGATAACGTTGATGCCCAAGAGTTGCAAGTAGTTGATGCTTTTCGCCAAGCACTTATCTTGGAAGAGCTATTACCTGCAAAATATGATGATCACCATACGATGTTAAGATTCTTGAGAGCAAGGAAATTTGACATTGAAAAAACAAAACAAATGTGGGCAGATATGCTTCAGTGGAGGAGGGAGTTTGGTGCTGACACCATCATGGAGGATTTTGAATTCAAGGAGAGAGATGAAGTTCAAAAATACTACCCGCAAGGGCATCACGGAGTTGATAAGGAAGGGCGACCTGTTTACATAGAAAAGTTGGGTCAGGTGGACTCTAACAAGCTGATGCAAGTAACAACTATGGATCGCTATCTTAAGTACCATGTTAGAGAGTTTGAGAAGACATTCGTTGTTAAGTTCCCTGCCTGTTCAATCTCAGCAAAGAAGCACATTGACCAAAGCACAACTATCTTGGATGTGCAAGGAGTGGGTCTCAAAAGTTTGAACAAAGCTGCAAGGGATCTCATCCAGCGTCTTCAGAAGATTGATGGTGACAACTATCCTGAGTCCTTGAACAGTATGTTCATCATCAATGCTGGTTCTGGATTTAGAATGTTGTGGAACAGTATTAAGTCGTTCCTTGATCCTAAGACCACCTCCAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGTACCTGTGCAGACAAAGGTGGCTGTATGCTTTCAGACAAGGGACCATGGAATGACATTGAAATCTTGAAGATGGTTCAAAATGGCGAAGGAAAATGCAAGAGGAAAACCTTATCTGGGATTGAAGAGAAAACAATCATTCAAGATGAAATAGCATGCCAAAAGGTAGTTAGTTATCTACCTTACAGTTTCAAGTTCAGTCTTGTCGCCTTTGTCCCAGTGATTGACAAGCAAGTTAATGCATCTTGGGAAAAAGCGGTACAAAATAATCAACTTGCAGCTTCTAAAGCTGCAGATTGTTTCCCTAGCGATGCTTCCAACACTTTTAACGGTTTTAGGATTCCATTTACTGGTGGAATCATTACCATTCTTATGGGAGTGATAACCATGCTCCGCATGACACGGAATATGCCAAGGAAAGTCACTGAAGCCACCGCCTTGTATGCTAACCCTCTATATTGTGATGGCAACATGATGAAAGCACCTGCCATTTCCATGAATGATCAAATGGCCCTGATGAAGCGCATGGCTGAACTCGAAGAGAAGGTGAATGTCCTCTCTATGAAACCTACCATGCCACCTGAAATGGAAGAATTGCTGAATAATGCTCTTAACAGAGTCAACACCCTGGAACAAGAGTTGGATAGTACCAAAAAGTCACTTGATGATGCCCTTGCTCGACAAGTGGAGCTTCAAGCTCACCTTGACAAAAAGAAAAAGAAGAAGAAATTCTTCCGCTGGTAA 1683 0.4201 MCDTMSMSSAPITDHRPVKGGLEMEYVEDDKKKKLGSLKKVAISASSKFRHSLQMKGRRHSRVVSVAIEDNVDAQELQVVDAFRQALILEELLPAKYDDHHTMLRFLRARKFDIEKTKQMWADMLQWRREFGADTIMEDFEFKERDEVQKYYPQGHHGVDKEGRPVYIEKLGQVDSNKLMQVTTMDRYLKYHVREFEKTFVVKFPACSISAKKHIDQSTTILDVQGVGLKSLNKAARDLIQRLQKIDGDNYPESLNSMFIINAGSGFRMLWNSIKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDIEILKMVQNGEGKCKRKTLSGIEEKTIIQDEIACQKVVSYLPYSFKFSLVAFVPVIDKQVNASWEKAVQNNQLAASKAADCFPSDASNTFNGFRIPFTGGIITILMGVITMLRMTRNMPRKVTEATALYANPLYCDGNMMKAPAISMNDQMALMKRMAELEEKVNVLSMKPTMPPEMEELLNNALNRVNTLEQELDSTKKSLDDALARQVELQAHLDKKKKKKKFFRW 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01050 560 SUPERFAMILY CRAL/TRIO domain 146 340 IPR036865 -
Gma11g01050 560 Gene3D - 64 131 - -
Gma11g01050 560 Pfam CRAL/TRIO domain 150 312 IPR001251 -
Gma11g01050 560 SMART sec14_4 144 315 IPR001251 -
Gma11g01050 560 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 558 - -
Gma11g01050 560 PRINTS Cellular retinaldehyde-binding protein signature 102 124 - -
Gma11g01050 560 PRINTS Cellular retinaldehyde-binding protein signature 271 290 - -
Gma11g01050 560 PRINTS Cellular retinaldehyde-binding protein signature 304 313 - -
Gma11g01050 560 SUPERFAMILY CRAL/TRIO N-terminal domain 70 140 IPR036273 -
Gma11g01050 560 SMART CRAL_TRIO_N_2 99 124 IPR011074 -
Gma11g01050 560 Coils Coil 482 502 - -
Gma11g01050 560 Pfam CRAL/TRIO, N-terminal domain 98 123 IPR011074 -
Gma11g01050 560 Gene3D - 132 343 IPR036865 -
Gma11g01050 560 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 144 318 IPR001251 -
Gma11g01050 560 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 10 558 - -
Gma11g01050 560 Coils Coil 229 249 - -
Gma11g01050 560 CDD SEC14 146 313 IPR001251 -
Gma11g01050 560 Coils Coil 513 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01050 Gma-Chr11 8923108 8927130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01050 78 309 Acyl Lipid Metabolism Gene Families AT5G47730 27.801 4.97e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01050 - - gmx:100792335 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00364 12 3019141 3023271 Gma11g01050 11 8923108 8927130 GST