Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00361 ATGAATGATAGTGAGAACAAGAATGCAAGAATCCAGCGCCAGCAGATTCAATTTGACACTGGAAGCAACTTTTCATTTCAAAGATTAAGTGAAAACATGGTTGTCCTTGCTGCTTCCATTGTGAGCAAATCTGGCAAAGTTCTAGTTTCTAGACAGTTTGTGGACATGTCTCGTATCAGAATTGAGGGACTTCTAGCAGCATTTCCCAAGTTAATAGGCACTGGAAAGCAACACACATATGTTGAGACGGAGAATGTGCGCTATGTTTACCAGCCAATGGAAGCTCTATACCTGCTTCTTGTAACAAACAAACATAGCAACATACTGGAAGACTTGGCAACTCTGAGACTTCTCTCCAAACTTGTTCCCGAATATTCTTACTCCCTTGATGAAGAGGATATTTGCCAAAATGCATTTGAGTTGATTTTTGCATTTGATGAAGTCATCTCTCTTGGGCACACGGAAAATGTGACTGTTGCACAAGTTAAGCAATACTGTGAGATGGAAAGTCATGAAGAGAAACTGCACAAGCTGGTTATGCAGAGCAAAATCAATGATACTAAGGATGTTATGAAGCGGAAAGCTAGTGAGATTGATAAAAGCAAGATTGAAAAGAACAGAGGTGATAAAGGGGGATTTGGTCCTTTACAGTCACTAGGCTCTGGAAAAATTGAAAATAGCTTTAGTGATTTGAGCATATCTAGCAGCGGAACTGGTTTTGCAAGTGGCTCTGGTTTTGGATTGAATTCTGATGTTGATTCCTTTTCTACCAAGTCTAAAGGTCGTCCAACTTCATCTGCCACTGCTCCACCAAAAGGTATTGGAATGAAGCTTGGTAAATCTCAAAGGACAAATCAGTTTTTGGAATCATTGAAAGCAGAAGGTGAGGTCATTCTTGAACATGTTCAGCCAAAACTTGGCCTGCCTCAGGCAGCTGCCCTACCATCAACAGATCCCATTTCTTTAACTGTTGAAGAGAAACTAAATGTGACACTAAAACGAGATGGTGGAGTCAGTAATTTTGATGTTCAAGGCACATTGTCTCTCCAAATTCTTGACAAAGAGGATGGACATATTCAAGTTCAGGTCCAGACAGGGGAGAATCAAGCCATCATTTTCAAGACACACCCTAACATGAATAAAGATTTATTTGCCAATGAAAATATACTAGGCCTAAAGGATCCCAATAGGCCTTTCCCCACGGGTCAAGCTGGTGGTTCTGAAGGTGTTGGTCTTTTAAAGTGGCGAATGCAAAGCACTGACGAGTCAATGGTGCCTCTGACAATCAACTGCTGGCCCTCTTCTTCTGGAAATGAAACTTACGTCAGCATTGAGTATGAGGCTTTGTCATTGTTTGATTTGCAGAATGTTGTGATCTCCGTACCTCTTCCAGCTCTTCGAGATGCACCATCTGTTAAGCAGATTGATGGGGAATGGAGGTATGACTCAAGGAATTCCTTTTTGGAGTGGTCTGTCCTTCTGATTGATAATTCAAACCGCAGTGGGTCAATGGAATTTGTTGTTCCACAAGCCGAACCATCAGCATTCTTCCCCATTTCAGTTCGTTTTATAGCAACTGAAACATTTAGTGACCTGAAGGTCACCAATGTCATACCGCTAAATGGTGGTAATCCTCCCAAGTATTCTCAGAGAACACAGTTGATCACAGAAAACTACCAAATTGTGTGA 1689 0.4139 MNDSENKNARIQRQQIQFDTGSNFSFQRLSENMVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLIGTGKQHTYVETENVRYVYQPMEALYLLLVTNKHSNILEDLATLRLLSKLVPEYSYSLDEEDICQNAFELIFAFDEVISLGHTENVTVAQVKQYCEMESHEEKLHKLVMQSKINDTKDVMKRKASEIDKSKIEKNRGDKGGFGPLQSLGSGKIENSFSDLSISSSGTGFASGSGFGLNSDVDSFSTKSKGRPTSSATAPPKGIGMKLGKSQRTNQFLESLKAEGEVILEHVQPKLGLPQAAALPSTDPISLTVEEKLNVTLKRDGGVSNFDVQGTLSLQILDKEDGHIQVQVQTGENQAIIFKTHPNMNKDLFANENILGLKDPNRPFPTGQAGGSEGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVSIEYEALSLFDLQNVVISVPLPALRDAPSVKQIDGEWRYDSRNSFLEWSVLLIDNSNRSGSMEFVVPQAEPSAFFPISVRFIATETFSDLKVTNVIPLNGGNPPKYSQRTQLITENYQIV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00361 562 PANTHER COATOMER SUBUNIT DELTA 33 561 IPR027059 GO:0006890|GO:0030126
Gma12g00361 562 Pfam Clathrin adaptor complex small chain 40 164 IPR022775 -
Gma12g00361 562 Gene3D - 35 173 - -
Gma12g00361 562 MobiDBLite consensus disorder prediction 254 280 - -
Gma12g00361 562 Pfam Adaptor complexes medium subunit family 316 540 IPR028565 -
Gma12g00361 562 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 317 561 IPR036168 -
Gma12g00361 562 MobiDBLite consensus disorder prediction 195 209 - -
Gma12g00361 562 CDD AP_delta-COPI_MHD 318 559 - -
Gma12g00361 562 Gene3D Mu homology domain, subdomain B 320 541 - -
Gma12g00361 562 ProSiteProfiles Mu homology domain (MHD) profile. 317 562 IPR028565 -
Gma12g00361 562 CDD Delta_COP_N 36 165 - -
Gma12g00361 562 Gene3D Mu homology domain, subdomain B 425 524 - -
Gma12g00361 562 MobiDBLite consensus disorder prediction 195 218 - -
Gma12g00361 562 SUPERFAMILY SNARE-like 37 174 IPR011012 -
Gma12g00361 562 PANTHER S-ACYLTRANSFERASE 33 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00361 Gma-Chr12 2959984 2968453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00361 K20471 - gmx:100780122 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00361 12 2959984 2968453 Gma11g01047 11 8868379 8878804 GST