Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01047 ATGGCTAAGAAAAATGATTGTCTAAACCCCACATGTCTGAAGATAAGAAGTTTCAGAAATCCAAAGCAACAAGTTAAGAGTAAGACCAGCCCACTTCTTTTTTTTTTTTCCAACGGTAGGTCTGGAAAGATCCAGCGTCAGCAGATTCAATTTGACACTGGAAGCAATTTCTCATTTCAAAGATTAAGTGAAAACATGGTTGTCCTTGCTGCATCCATTGTGAGCAAATCTGGCAAAGTTCTAGTTTCTAGACAGTTTGTGGACATGTCTCGTATCAGAATTGAGGGTCTTCTAGCAGCATTTCCCAAGTTAATAGGCACTGGAAAGCAACACACATATGTTGAGACGGAGAATGTGCGCTATGTTTACCAGCCAATGGAAGCACTATACCTGCTTCTTGTAACAAACAAACATAGCAACATACTGGAAGATTTGACAACTCTGAGACTTCTCTCCAAACTTGTTCCTGAATATTCTTACTCCCTTGATGAAGAGGATATTTGCCAAAATGCATTTGAGTTGATTTTTGCATTTGATGAAGTCATCTCTCTTGGGCATGCGGAAAATGTGTCTGTTGCACAAGTTAAGCAATACTGTGAAATGGAGAGTCATGAAGAGAAACTGCACAAGCTGGTTATGCAGAGCAAAATCAATGATACTAAGGATGTTATGAAGCGGAAAGCTAATGAGATTGATAAAAGCAAGATTGAAAAGAACAGAGGTGATAAAGGGGGATTTGGTCCTTTACAGTCACTAGGCTCTGGAAAAATTGAAAATAGCTTTAGTGATTTGAGCATAACTAGCAGCGGACCTGGTTTTGGAAGTGGCTCTGGTTTTGGATTGAGTTCTGATGTTGGTTCCTTTTCTACCAAGTCTAAAGGTGGTCCAACTTCATCTGCCACTGCTCCACCAAAAGGTCTTGGAATGAAGCTTGGTAAATCTCAAAGGACAAATCAGTTTTTGGAATCATTGAAAGCAGAAGGTGAGGTCATTCTTGAACATGTTCAACCAAAACTTGCTCAGGCAGCTGCCCCACCATCTACAGATCCCATTTCTTTAGCTGTTGAAGAGAAACTAAATGTGACACTAAAACGAGATGGTGGAGTCAGTAATTTTGATGTTCAAGGCACATTGTCTCTCCAAATTCTTGACAAAGAGGATGGACATATTCAAGTTCAGGTCCAAACTGGGGAGAATCAAGCCATCATTTTCAAGACACACCCTAACATGAATAAAGAATTATTTGCCAATGAAAATGTACTAGGTCTAAAGGATCCCAATAGGCCTTTCCCCACGGGTCAAGCTGGTGGTTCTGAAGGTGTTGGTCTTTTAAAGTGGCGAATGCAAAGCACTGATGAGTCAATGGTGCCTCTGACAATCAACTGCTGGCCCTCTTCTTCTGGAAATGAAACTTATGTCAGCATTGAGTATGAGGCTTCATCATTGTTTGATTTGCGGAATGTTGTGATCTCAGTACCTCTTCCAGCTCTTCGAGATGCACCATCTGTTAGACAGATTGATGGGGAATGGAGGTATGACTCAAGGAATTCCTTTTTGGAGTGGTCTGTCCTTCTGATTGATAATTCAAACCGCAGTGGGTCAATGGAATTTGTTGTTCCACAAGCCGAATCATCAGCATTCTTCCCCATTTCAGTTCGTTTTATAGCAACTGAAACATTTAGTGACCTGAAGGTCACCAGCATCATACCGCTAAATGGGGGTAATCCTCCTAAGTATTCTCAGAGAACACAGTTGATCACAGAAAACTACCAAATTGTGTGA 1782 0.4091 MAKKNDCLNPTCLKIRSFRNPKQQVKSKTSPLLFFFSNGRSGKIQRQQIQFDTGSNFSFQRLSENMVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLIGTGKQHTYVETENVRYVYQPMEALYLLLVTNKHSNILEDLTTLRLLSKLVPEYSYSLDEEDICQNAFELIFAFDEVISLGHAENVSVAQVKQYCEMESHEEKLHKLVMQSKINDTKDVMKRKANEIDKSKIEKNRGDKGGFGPLQSLGSGKIENSFSDLSITSSGPGFGSGSGFGLSSDVGSFSTKSKGGPTSSATAPPKGLGMKLGKSQRTNQFLESLKAEGEVILEHVQPKLAQAAAPPSTDPISLAVEEKLNVTLKRDGGVSNFDVQGTLSLQILDKEDGHIQVQVQTGENQAIIFKTHPNMNKELFANENVLGLKDPNRPFPTGQAGGSEGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVSIEYEASSLFDLRNVVISVPLPALRDAPSVRQIDGEWRYDSRNSFLEWSVLLIDNSNRSGSMEFVVPQAESSAFFPISVRFIATETFSDLKVTSIIPLNGGNPPKYSQRTQLITENYQIV 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01047 593 ProSiteProfiles Mu homology domain (MHD) profile. 348 593 IPR028565 -
Gma11g01047 593 PANTHER COATOMER SUBUNIT DELTA 66 592 IPR027059 GO:0006890|GO:0030126
Gma11g01047 593 MobiDBLite consensus disorder prediction 228 251 - -
Gma11g01047 593 SUPERFAMILY SNARE-like 70 207 IPR011012 -
Gma11g01047 593 Gene3D Mu homology domain, subdomain B 351 572 - -
Gma11g01047 593 CDD AP_delta-COPI_MHD 349 590 - -
Gma11g01047 593 Gene3D Mu homology domain, subdomain B 456 555 - -
Gma11g01047 593 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 348 592 IPR036168 -
Gma11g01047 593 MobiDBLite consensus disorder prediction 287 313 - -
Gma11g01047 593 PANTHER S-ACYLTRANSFERASE 66 592 - -
Gma11g01047 593 MobiDBLite consensus disorder prediction 228 242 - -
Gma11g01047 593 Pfam Clathrin adaptor complex small chain 73 198 IPR022775 -
Gma11g01047 593 Pfam Adaptor complexes medium subunit family 347 574 IPR028565 -
Gma11g01047 593 Gene3D - 68 206 - -
Gma11g01047 593 CDD Delta_COP_N 69 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01047 Gma-Chr11 8868379 8878804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01047 K20471 - gmx:100785260 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00361 12 2959984 2968453 Gma11g01047 11 8868379 8878804 GST