Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00340 ATGGTTTCTCTATTAAATCCAGAAGCACCGGAATATCTACCAAGCCACAACCACAAGCTTCAGCAACAGCAACAACAACTGCAACCCCTTGCTTGTCCCACTTCCTTATTTCCTCATCACGGCCACTTCTCAGTGTTCTCTTTATTTCCCTCACGACATCCTAACCCTTTCTTTTATTATCCCACTTTAACACTTCCACCACCACCTTCCATTCCATTAGCGCTAGAAGCTCATCAACAAACTCGTTTTCATAACATAAAAAATGATTCTGATTCTAACCCCGTTGAAGCACATGCAGTGCACCAGAAGAAGGATCAAGTGGTACTAGCCGAACCCAAAACTGGTGGTGGTTCGATAGGACTTGTAAAGAAGCAAGCTTTGAATGCTTACATTAATGGCCGCCGTTCTGCTGAGAGTTGGAGACAGAAGAGTTACCCACCGAGAAAGAAGGTGGAAGAAAATGGTCAACGCAAAAATGTTGACTTTTTGAGGAACCGAAAGGTTTTTAGGCAACCAGATGATGAACAACCCTTCAGGGGTTTTCCCAAGAGGAATCGTTTTAATCTCTCGTTGCCAGTTAGGGATGGCGAAACCACTGTAATGATCAGAAATATTCCCAGCAAATACACCCGAGAATTGCTGGTGGATTTTCTAGAAGATCATTGTCTGAAGGTGAATCGTGGAGATAAAGAGGCAGCTTtcaaggggaaagacgaagaacccattggtttagcttttgatttcgtttatttgcccattgatttcaaAACTAGGATGAACAAGGGTTACGCTTTTGTGAACTTCACTCAGCCCCAGGCAGCTCGGAAGTTTCTTAAGACAGCCTCCAATTTGAAATGGGAGTTGTTCCAGTCTAACAAGATACGTGATGTGGTTTCTGCACGTTTGCAAGGGAAGGAACAATTGGAGGAACACTTCGCAACTATGAACTTTCCATATGAGTCCGAGGACGTTCTGCCGGTGTCCTTTAGCCCACCTTGTGATGGTGTAAACAAGGGAGAGCAAAGGACTATAGGGAATCTTACGAAGCGTCAACATGTTTGA 1062 0.4153 MVSLLNPEAPEYLPSHNHKLQQQQQQLQPLACPTSLFPHHGHFSVFSLFPSRHPNPFFYYPTLTLPPPPSIPLALEAHQQTRFHNIKNDSDSNPVEAHAVHQKKDQVVLAEPKTGGGSIGLVKKQALNAYINGRRSAESWRQKSYPPRKKVEENGQRKNVDFLRNRKVFRQPDDEQPFRGFPKRNRFNLSLPVRDGETTVMIRNIPSKYTRELLVDFLEDHCLKVNRGDKEAAFKGKDEEPIGLAFDFVYLPIDFKTRMNKGYAFVNFTQPQAARKFLKTASNLKWELFQSNKIRDVVSARLQGKEQLEEHFATMNFPYESEDVLPVSFSPPCDGVNKGEQRTIGNLTKRQHV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00340 353 SUPERFAMILY RNA-binding domain, RBD 192 285 IPR035979 GO:0003676
Gma12g00340 353 MobiDBLite consensus disorder prediction 1 25 - -
Gma12g00340 353 PANTHER RNA BINDING PROTEIN 54 342 - -
Gma12g00340 353 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 2 54 342 - -
Gma12g00340 353 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 198 295 IPR000504 GO:0003723
Gma12g00340 353 Gene3D - 129 311 IPR012677 -
Gma12g00340 353 Pfam RNA recognition motif 2 198 312 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00340 Gma-Chr12 2817194 2819026 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00340 - - gmx:102668786 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00340 12 2817194 2819026 Gma12g00340 12 2817194 2819026 ECH
Gma12g00340 12 2817194 2819026 Gma11g01029 11 8711158 8713056 GST