Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01029 ATGGTTTCTCCACTGAACCCAGAAGCTCTGGAATATTTACCAAGGCACAATCACAAGCTTCAGCAACAACAACAGCAAGTACTTCAACCTCAACCCCTTCCTTGTTCCACTTTCCCTCCCACTTCCATTTTTACTCCTCACTGCAACTTCTTGTTACTGTTCTCTTCATTTCCCTCACGTCATCCTTATAACCCCTTCTATTATCCCACTCTAACACTTCCACCATTACCACCTTCTTCCATTCCCTTAGCACTAGAAGCTGATCAACCAACTCGTTTTCATGAAATAAAAAATGGTTCTGATTCTGATTCTGATTCTAACCCGGTTGAAGCACATGCAGTGAACAAGAAGAAGGATCAAATGGTAATAGCTGAAGAACCAAAAACTGGTTGTGGTTCGATAGGATTTGTAAAGAAGCGAGCTTTCAAGGCTTACATTAATGGCCGGTGTCTTGAGAGTTGGAGACAAAAGAGTTACCCGCCGAGAAGGAAGGTGGAAGAAAATGGTCAACGTAAAAGTGTTGACTTTTTGAGGAACCGAAAGGTTTTTAGGCACCACCCAGCAAATGAACCCTTCAGGGGTTTTCCCAAGAGGAATCGTTTTAATCCCTCGTTGCCTGTTAGGGATGGCGAAACCACTGTGATGATCAGAAATATTCCCAGCAAATACACCCGAGAATTGCTGGTGAAGTTTCTGGAAGATCATTGTCTGAAAGTGAATCGTACTACAGAAAATGAAGCTTGCAAGGAGAAAGGCGAAGAAGAATCCATTGGTTTAGCTTTTGATTTCGTTTATTTGCCCATTGATTTCAAGTACGCTACGAACTCCTTTTGTTTAGTTAGCCTTTCTCTCACTTTCTCTCACTGGATGATTGTTTTCATGCTTTGCAGATCTAGGATGAACAAGGGATACGCTTTTGTGAACTTCACTAAGCCCCAGGCAGCTCGGAAGTTTCGTAACACAGCCTCCAGATTGAAATGGGACATGTTCCAGTCTAACAAGATACGTGAAGTGGTTTCTGCACGTTTACAAGGGAAGGAACAATTGGAGAAACACTTCGAAACGATGAACTTTCCTTGTGACTCCGAGGATGTTTTGCCCGTGAGCTTTAGCCCACCTCGCGATGGTGTAAACAAGGGAGATCAAAGGACTATGGGGAATCTTATGAAGCGCCAACATGTTTGA 1185 0.4312 MVSPLNPEALEYLPRHNHKLQQQQQQVLQPQPLPCSTFPPTSIFTPHCNFLLLFSSFPSRHPYNPFYYPTLTLPPLPPSSIPLALEADQPTRFHEIKNGSDSDSDSNPVEAHAVNKKKDQMVIAEEPKTGCGSIGFVKKRAFKAYINGRCLESWRQKSYPPRRKVEENGQRKSVDFLRNRKVFRHHPANEPFRGFPKRNRFNPSLPVRDGETTVMIRNIPSKYTRELLVKFLEDHCLKVNRTTENEACKEKGEEESIGLAFDFVYLPIDFKYATNSFCLVSLSLTFSHWMIVFMLCRSRMNKGYAFVNFTKPQAARKFRNTASRLKWDMFQSNKIREVVSARLQGKEQLEKHFETMNFPCDSEDVLPVSFSPPRDGVNKGDQRTMGNLMKRQHV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01029 394 MobiDBLite consensus disorder prediction 371 394 - -
Gma11g01029 394 PANTHER RNA BINDING PROTEIN 93 382 - -
Gma11g01029 394 MobiDBLite consensus disorder prediction 94 115 - -
Gma11g01029 394 SUPERFAMILY RNA-binding domain, RBD 210 322 IPR035979 GO:0003676
Gma11g01029 394 Pfam RNA recognition motif 2 297 353 IPR007201 -
Gma11g01029 394 Gene3D - 206 337 IPR012677 -
Gma11g01029 394 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 2 93 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01029 Gma-Chr11 8711158 8713056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01029 - - gmx:102662025 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01029 11 8711158 8713056 Gma11g01029 11 8711158 8713056 ECH
Gma12g00340 12 2817194 2819026 Gma11g01029 11 8711158 8713056 GST