Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00274 ATGTGGGGATGGGAGCAGGTTGCGATCATTTTGTTGAAGAGTGTGGATGGTGCCGAAGAGAAGCAAGAGACAGAAGTAGCTATGCCGAAGCCTTGTGACTTGAAAATCAACATTGATGGTCAGCAGATATTCCTTTTGAAAGAGAAGGTTATATCAAAATACTGTGGAGGGTTGAAGAAGATCTTGAATCACCAAAAGAGAAGATGTCATGTGAAGGAGTTGGGGATTAGAATCAATGATTTCCCTGGAGGACCAAAAGGGTTTGAGCTAGTTTCAATGTTCTGTTACAACAATGGAAAAATCCAAATCACTGTGGCTAATGTGTCTCTCCTCCACTGTTGTGCTGTTTATCTTGGAATGACTGAGGAGGCATTCAGCAACAATCTCTTGCAACAAACAGAAACTTTTCTTGAGAGAATCTATTACTGGAAATGGAATGACATACTTGCAAGTCTCAAGAGTTGCCAGCTGTTTTATACATATGCAGATGGCTATGGTCTCTTGGAGAAGATCATTAGTGCCTTAGCAAAGTTTGTCCAGAATTCAGATTCAAACCTCCTCACTTCCTCGCCTTCGGCATCATCATGGTCATCTTCACCAGAAAGCAACTTTGCCAAGAGATTCTCTTTCTCATCCAAGAAAACTACCCCAGAAAAAATCAAGTCATGTTTGCCGCGCAAGGCATGGTGGTTTGATGATTTGGCAACTTTACCACCAACGATCATTGAGAAACTCTTCCAGACTATTGGAGCATACAAAGCTGATAACAAGGATTTAATCCTCACAAGATTTCTGTTGCATTATCTGAAAATAGCTACTCAAACCAAAATGGTTAATTGCAGAAACAGCAATGAGTATGCTGCTCTTGCAGAAACAGCTGCTTATGGGGTCATATCTGTTGGTAAAGAGACATTTTCTTGCAGAGGCCTTTTTTGGGTACTAAGGATTGTATCTAAGTTTGGGTTGAGTAGAGACTGCAGAACTGAATTGGAGAAATTGATTGGTGGAATGCTTGAGCAAGCTACACTGGATGATCTTCTAGTCTCTGGGCATGACATGGGAGTTTATTATGATGTTAATTTGGTGATAAGATTGGTTAGATTATTTGTTGATATCAATGGTTCTGATGGACTGTCTTTACAGAAAGTGAAAAGGGTTGGTAGATTAATTGACAAGTATTTGAGAGAGATATCTCCTGACCAGAACCTCAAGATCTCTAAATTTCTTGGAGTAGCAGAATGCTTGCCAGACTCTGCAAGGGATTGCTATGATGGGGTCTACAAGGCCATTGACATCTATCTTGAGTCTCATCCAACTATCACATTTGAGGAAAGATCGAGACTGTGTAGATGTCTTAATTACAGCAAACTCAGCTTTGAAGCTTGTAAAGATCTGGCCAAAAACCCCAGAATACCTCCAAGGGTTGCAATGCAAGCTCTTATTTCTCAACAGCCAAAAAATTCAACAAGTGACCGTGTAACTGAGAGTCCAAGGATGAAGCATTCCCAAATAGTTTTGTACAATGAAGCCAGCAGAGAAAGCTTCTCCCAAGAGAGGAGAGATATGAGACTAAACATAGAGAAAATGCAATGGGGTGTAATAGAACTGGCTAAATTACGCAAGCAAACGAACGTTCAGATGCCACAGTTGTTTACCCATAATGTCTTGCTTAATCCTGCTCGTGCTTCATCCTCACCAAGATTTTGTTGA 1710 0.4064 MWGWEQVAIILLKSVDGAEEKQETEVAMPKPCDLKINIDGQQIFLLKEKVISKYCGGLKKILNHQKRRCHVKELGIRINDFPGGPKGFELVSMFCYNNGKIQITVANVSLLHCCAVYLGMTEEAFSNNLLQQTETFLERIYYWKWNDILASLKSCQLFYTYADGYGLLEKIISALAKFVQNSDSNLLTSSPSASSWSSSPESNFAKRFSFSSKKTTPEKIKSCLPRKAWWFDDLATLPPTIIEKLFQTIGAYKADNKDLILTRFLLHYLKIATQTKMVNCRNSNEYAALAETAAYGVISVGKETFSCRGLFWVLRIVSKFGLSRDCRTELEKLIGGMLEQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVDINGSDGLSLQKVKRVGRLIDKYLREISPDQNLKISKFLGVAECLPDSARDCYDGVYKAIDIYLESHPTITFEERSRLCRCLNYSKLSFEACKDLAKNPRIPPRVAMQALISQQPKNSTSDRVTESPRMKHSQIVLYNEASRESFSQERRDMRLNIEKMQWGVIELAKLRKQTNVQMPQLFTHNVLLNPARASSSPRFC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00274 569 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 29 543 - -
Gma12g00274 569 Pfam NPH3 family 229 462 IPR027356 -
Gma12g00274 569 ProSiteProfiles NPH3 domain profile. 228 486 IPR027356 -
Gma12g00274 569 PANTHER OS12G0117600 PROTEIN 29 543 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00274 Gma-Chr12 2203600 2209963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00274 33 484 EF-hand Containing Proteins AT3G44820 27.345 9.52e-53 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00274 - - gmx:100808259 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00274 12 2203600 2209963 Gma11g00951 11 8042310 8045584 GST