Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00951 ATGCCGAAGCCTTGTGACTTGCAAATCAACATTGATGGTCAGCAGATATTCCTTTTGAAAGAGAAGGTCATATCAAAATACTGTGGAGGGTTGAAGAAACTATTGAATCACCAAAAGAGAAGATGTCATGTGAAGGAGTTGGGGATTAGAATCAATGATTTCCCTGGAGGACCAGAAGGGTTTGAGCTAGTTTCAAGGTTTTGTTACAGCAATGCCAAAATCCAGATCACTGTGGCTAATGTGTCTCTCCTTCACTGTTGTGCTGTTTATCTTGGAATGACTGAGGAATCATTCAGCAACAATCTCTTGCAACAAACAGAAACTTTTCTTGAGAGAATCTATCACTGGAAATGGAATGACATACTTGCAAGTCTCAAGAGTTGCCAGCTGTTTTATGCATATGCAGATGGCTATGGTCTCTTGGAGAAGATCATTAGTGTCTTGGCAAAGTTTGTCCAGAATTCAGATTCAAACCTCCTCACTTCCTCGCCTTCAGCATCGTCGTCCTCTTCTTCACCAGAAAGCAGTTTCGCCCAGAGATTCTCTTTCTCATCCAAGAAAACTACCCCAGAAAAAATCAAGTCAAGTTTGCCGCGCAAGGCGTGGTGGTTTGATGATTTGGCAACTTTACCACCAAAGATCATTGAGAAACTCTTCCAGACTATTGGAGCATACAAAACTGATAACAAGGACTTAATCCTCACAAGATTTCTGTTGCATTATCTGAAAAATATAGCTACTCAAAGCAAAGTGGTTAATTGCAGGAACAGCAATGAGTATGCTGCTCTTGCAGAAACAGCTGCTTATGGGGTCATATCTGTTGGTAAAGAGATATTTTCTTGCAGAGGTCTTCTTTGGGTACTAAGGATTGTATCTAAGTTTGGGTTGAGTAGAGACTGCAGAACTGAATTGGAGAAATTGATTGGTGGAATGCTTGAGCAAGCTACACTGGATGATCTTCTAGTCTCTGGACATGACATGGGAGTTTATTATGATGTTAATTTGGTGATAAGATTGGTTAGATTATTTGTTGATATCAATGGTTCTGATGGACTACAGAAAGTGAAAAGGGTTGGTAGATTAATTGACACGTATTTGAGAGAGATATCCCCTGACCACAACCTCAAGATCTCTAAATTTCTTGGAGTAGCAGAATGCTTGCCAGACACTGCAAGGGATTGCTATGATGGGGTCTACAAAGCCATTGACATCTATCTTGAGTCTCATCCAACTATCACATTTGAGGAAAGGTCGAGATTGTGTAGATGTCTTAATTACAGCAAACTCAGCTTTGAAGCTAGTAAAGATCTGGCCAAGAACCCCAGAATACCTCCAAGGGTTGCAATGCAGGCTCTTATTTCTCAACAACCAAAAATTTCAACAAGTGACATAGTAACTGAGAGTCCAAGGATGAAGCACTCCCAATTAGTTTTGTCCAATGAAGCCAACAGAGAAAGCTTCTCCCAAGAGAGGAGAGATATGAAACTAAACATAGAGAAAATGCAATGGGGTGTAATAGAACTGGCCAAATTACGCAAGCAAATGAACGGTCAGGAGCCACAGTTGTTTACCCATAATGTCTTGCTTAATCCTGCTCGTGCTTCATCCTCACCAAGATTTTGTTGA 1626 0.4071 MPKPCDLQINIDGQQIFLLKEKVISKYCGGLKKLLNHQKRRCHVKELGIRINDFPGGPEGFELVSRFCYSNAKIQITVANVSLLHCCAVYLGMTEESFSNNLLQQTETFLERIYHWKWNDILASLKSCQLFYAYADGYGLLEKIISVLAKFVQNSDSNLLTSSPSASSSSSSPESSFAQRFSFSSKKTTPEKIKSSLPRKAWWFDDLATLPPKIIEKLFQTIGAYKTDNKDLILTRFLLHYLKNIATQSKVVNCRNSNEYAALAETAAYGVISVGKEIFSCRGLLWVLRIVSKFGLSRDCRTELEKLIGGMLEQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVDINGSDGLQKVKRVGRLIDTYLREISPDHNLKISKFLGVAECLPDTARDCYDGVYKAIDIYLESHPTITFEERSRLCRCLNYSKLSFEASKDLAKNPRIPPRVAMQALISQQPKISTSDIVTESPRMKHSQLVLSNEANRESFSQERRDMKLNIEKMQWGVIELAKLRKQMNGQEPQLFTHNVLLNPARASSSPRFC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00951 541 PANTHER OS12G0117600 PROTEIN 2 515 IPR043454 -
Gma11g00951 541 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 515 - -
Gma11g00951 541 Pfam NPH3 family 202 434 IPR027356 -
Gma11g00951 541 ProSiteProfiles NPH3 domain profile. 201 458 IPR027356 -
Gma11g00951 541 SUPERFAMILY POZ domain 3 95 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00951 Gma-Chr11 8042310 8045584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00951 6 462 EF-hand Containing Proteins AT3G44820 28.056 4.73e-55 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00951 - - gmx:100795481 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00274 12 2203600 2209963 Gma11g00951 11 8042310 8045584 GST