Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00252 ATGGCGACTCTGCGGCTCACCTTCTCCGACTCAACCACCTTGTTCAGGCCTTCTCTACCTTCCACGCGAACCTTCTCTCGAAACCGAAGCCTCATTGTCAAAGCCTCTTCTTCTGAAGACGATTTCTCCAGAAGCAGCAGAAGACGCTTCATCGCCGAAACCGCCGCACTCTCGGTCTCGCTCCCTCAGTTAACGGCGCGTTCTGAAGACGCGCTTTCGGAGTGGGAGAGAGTGTACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATCGCTTTTGTCCCCGACGACCCCAACCACGGTTTTCTTCTCGGGACGAGGCAAACCATTCTGGAGACGAAAGATGGAGGAAACACTTGGGCTCCGCGTTCGATTCCTTCTGCTGAAGACGAAGATTTCAACTATCGATTCAATTCTATCAGCTTCAAAGGGAAGGAAGGGTGGATTGTCGGAAAACCTTCGATTCTGTTGTACACTTCCGATGCCGGAGACAGTTGGGAGAGGATACCTCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCGACCGGTGAGAAGAGTGCGGAGATGGTGACCGACGAAGGTGCAATATATGTTACTGCAAACAGAGGTTACAACTGGAGGGCTGCTGTCCAGGAAACTGTGTCAGCTACTCTTAACAGaacagtttctagtggtattagtggtgcaagctactacactggaactttcaatactgtcaatcgctctccagatggaaggtatgttgcagtctcaagtcggggaaacttctacttaacctgggagcctggtcaGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCAAAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCCGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGATGAGGCTTGGGCAGCAGGAGGAAGTGGTATTCTCTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCCGACAACATTGCTGCGAATTTATACTCAGTGAAGTTCATTGATGAGAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTCCGCTACCTTGGATAG 1182 0.4509 MATLRLTFSDSTTLFRPSLPSTRTFSRNRSLIVKASSSEDDFSRSSRRRFIAETAALSVSLPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00252 393 Gene3D - 129 358 IPR015943 GO:0005515
Gma12g00252 393 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 38 393 - -
Gma12g00252 393 PIRSF Photosystem_II_Ycf48-like 39 393 IPR016705 -
Gma12g00252 393 Pfam Photosynthesis system II assembly factor YCF48 71 391 IPR028203 -
Gma12g00252 393 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 74 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00252 Gma-Chr12 1959293 1963229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00252 - - gmx:100805606 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00252 12 1959293 1963229 Gma11g00928 11 7753996 7757802 GST