Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00928 ATGGCCACTCTGCAATTCACCTTCACCGACTCAACCACATTGTTCAGGCCTTCTCTACCTTCCACGCGAACCTTCTCTCGAAACCGAAGCCTCATTGTCAAAGCCTCTTCTTCTTCTTCTGACGACTTCTCCAAAAGCAGGCGACGCTTCATCGCCGAAACCGCCGCACTCTCGGTCTCGCTCCCTCAGTTAGCGGCGCGTGCCGAAGACGCGCTTTCGGAGTGGGAGAGAGTATACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATCGCTTTTGTCCCCGACGATCCCAACCACGGTTTTCTTCTCGGGACGAGGCAAACCATTCTGGAGACGAAAGATGGAGGAAACACTTGGGCTCCGCGTTCGATTCCTTCTGCTGAAGACGAAGATTTCAACTATCGCTTCAATTCCATCAGCTTCAAAGGGAAGGAAGGGTGGATTGTCGGAAAACCTGCGATTCTGTTGTACACTTCCGATGCCGGAGACAGTTGGGAGAGGATACCTCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCAACCGGTGAGAAGAGTGCGGAGATGGTGACCGACGAAGGTGCCATATATGTTACTGCAAACAGAGGTTACAACTGGAGGGCTGCTGTGCAGGAAACTGTCTCAGCTACTCTTAACAGaacagtttctagtggtattagtggtgcaagctactacactggaactttcaatactgtcaatcgctctccagatggaaggtatgttgcagtctcaagtcggggcaacttctacttaacctgggagcctggtcaGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCCGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGATGAGGCATGGGCAGCAGGAGGAAGTGGTATTCTTTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTGAAGTTCATTGATGAGAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1182 0.4492 MATLQFTFTDSTTLFRPSLPSTRTFSRNRSLIVKASSSSSDDFSKSRRRFIAETAALSVSLPQLAARAEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00928 393 Pfam Photosynthesis system II assembly factor YCF48 71 391 IPR028203 -
Gma11g00928 393 Gene3D - 129 359 IPR015943 GO:0005515
Gma11g00928 393 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 39 393 - -
Gma11g00928 393 PIRSF Photosystem_II_Ycf48-like 38 393 IPR016705 -
Gma11g00928 393 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 74 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00928 Gma-Chr11 7753996 7757802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00928 - - gmx:100810566 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00252 12 1959293 1963229 Gma11g00928 11 7753996 7757802 GST