Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00239 ATGGCCTCAACTACACTAACAACCCTCTCCCTCCGCAAcctctcttatcctacaccctcctcctcttcttaccctacgcacctcTCCGCCAACCCCTCCTCCCTCCAATTCCCCAACTTCTCCCACCGCGCCACCACCACGCGCCGCGCCCGCGTCGTCGTCGTCTCCGCCGTCGAGGCACCGGAGAAAATCACCAAGCTCGGCGACGAAATCGCGGGACTCACGCTCGAGGAAGCCAAGAACCTCGTCGACTTCCTCCAGGACAAGCTCGGCGTCTCCGCGGCAGCGTTCGCCCCCGTAGCCGTCGCCGCGGGTGCCGTCGGCGCCGTGGCGGACGCTCCGGCGGCGGTGGAGGAGAAGACGGAGTTCGACGTGTTGATCGAGGAGGTGCCGAGCAACGCGAGAATCGCGGTGATTAAGGCGGTGAGGGCGCTGACTAACCTGGCGCTGAAAGAGGCGAAGGAGTTGATAGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGATTTCGAAGGACGAAGCTGAAGATGCGAAGAAGCAACTTGAAGAAGCCGGTGCCAAGATTTTCTCCTCATCATAA 576 0.5677 MASTTLTTLSLRNLSYPTPSSSSYPTHLSANPSSLQFPNFSHRATTTRRARVVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAVGAVADAPAAVEEKTEFDVLIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEGISKDEAEDAKKQLEEAGAKIFSSS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00239 191 Pfam Ribosomal protein L7/L12 dimerisation domain 63 111 IPR008932 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 TIGRFAM L12: ribosomal protein bL12 65 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 PANTHER 39S RIBOSOMAL PROTEIN L12 1 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 63 125 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 CDD Ribosomal_L7_L12 62 187 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 Gene3D Single helix bin 63 118 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 Pfam Ribosomal protein L7/L12 C-terminal domain 123 187 IPR013823 GO:0003735|GO:0006412
Gma12g00239 191 SUPERFAMILY ClpS-like 118 187 IPR014719 -
Gma12g00239 191 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 1 187 - -
Gma12g00239 191 Hamap 50S ribosomal protein L7/L12 [rplL]. 57 190 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma12g00239 191 Gene3D - 119 188 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00239 Gma-Chr12 1863595 1865211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00239 K02935 - gmx:100800454 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00239 12 1863595 1865211 Gma11g00916 11 7662180 7663312 GST