Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00916 ATGGTAATAGTCACCTCAACCCACCCCATAACCAACCCCTTCATAATCTCCTTATCCTATCTTGATCCTTCACTTCACTTCTTCCATTCTCTCCCTCCCTCAAATCCCAAACCAGCAAAAACCTTTCTTCACAAAATGGCCTCAACAACTCTAACAACCCTCACCCTCCGCACGCTATCTTATCCTACACCCTCCTCTTCTTACCCTACGCACCTCTCCGCCAAACCCTCCTCCCTCCAATTCCCCAATCTCTCCCACCGCGCCGCTACCACGCGCCGCCCCCGTGTCGTCGTCTCCGCCGTTGAGGCGCCGGAGAAAATCACCAAGCTCGGCGACGAAATCGCCGGACTCACGCTCGAGGAGGCCAAGAACCTCGTCGACTTCCTCCAGGACAAGCTCGGCGTCTCCGCGGCGGCGTTCGCCCCTGTGGCAGTCGCCGCGGGTGCCGGCGGCGCTGTGGCGGACGCGCCGGCGGTGGTTGAGGAGAAGACGGAGTTCGACGTGGTGATCGAGGAGGTGCCGAGCAACGCTCGAATCGCGGTGATTAAGGCGGTGAGGGCATTGACGAACCTAGCGCTGAAGGAGGCGAAGGAGTTGATCGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGATTTCAAAGGACGAAGCTGAAGATGCGAAGAAGCAACTCGAAGAAGCTGGTGCCAAGGTTACCATTGCTTAA 702 0.5755 MVIVTSTHPITNPFIISLSYLDPSLHFFHSLPPSNPKPAKTFLHKMASTTLTTLTLRTLSYPTPSSSYPTHLSAKPSSLQFPNLSHRAATTRRPRVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAGGAVADAPAVVEEKTEFDVVIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEGISKDEAEDAKKQLEEAGAKVTIA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00916 233 Gene3D - 162 232 IPR014719 -
Gma11g00916 233 Pfam Ribosomal protein L7/L12 dimerisation domain 106 152 IPR008932 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 PANTHER 39S RIBOSOMAL PROTEIN L12 46 232 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 CDD Ribosomal_L7_L12 105 232 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 Gene3D Single helix bin 106 161 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 TIGRFAM L12: ribosomal protein bL12 108 232 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 Coils Coil 216 233 - -
Gma11g00916 233 Hamap 50S ribosomal protein L7/L12 [rplL]. 100 233 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 106 168 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gma11g00916 233 Pfam Ribosomal protein L7/L12 C-terminal domain 166 232 IPR013823 GO:0003735|GO:0006412
Gma11g00916 233 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 46 232 - -
Gma11g00916 233 SUPERFAMILY ClpS-like 161 232 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00916 Gma-Chr11 7662180 7663312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00916 K02935 - gmx:100779891 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00239 12 1863595 1865211 Gma11g00916 11 7662180 7663312 GST