Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00223 ATGGAGACAGTTTGGGGCAGCCTGAGCAGGAAGAAAAGTGGTGGAAACGGACAGCTTCTAGACGCTTCCAATATTATGGAGTTGGTTGAAAACCAGCAAGTTTTTACCACCTTGGTGGACCATAAGTTTCACAGACAAAGATGCCAAACTCTCTGTCAAACACCTCCAACCTGCTGCTCTCACTCCACTAATCCTCATTCTCATCACATCTATTTCGAGGTTTCTCTTTCTCTCTACTCACTCATGTCTTCTTTTTCTTTCTTGCTGTTGAATGAATTCACCCATGGGAAGCAGGAAAAAGTGAGCAAGAGTGAGTTCAAAGAGGTTCTCTCAGACATTCTATTGGGTATGGCTGCTGGACTGAAGCGTGACCCTATTGTGATACTTCGCATTGATGGGGAAGATCTTCTGGAGTTTGTTAATGGTTCAGGTTATGAAGCTGAAATGGTATCCATATTCTCTCAAATTGAGTCCCCTGACAGATCACTTCATGACCATATAATTGAAGCTCTTGGCAAGCTCACTGTTGAGCAAGGAATTCCTCCTACATCAGATTCTTGGGTATTGAGCAACATTGTGGAACCGGCACTGCTATCTCAAGATGGCTCTGATTTGGATAAGCCTGTTTCTCAAGAGACATTTTTGGAGGAATTTAAGATAGTCGCAATGAGTGTGGCTAATCATCTTAAGGAACAACCTGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTGGACAAGACTTTGAGCTCAGCTATAGAGACTTTGCCCAAAGATCGAAATGGAAAGCTTTCAAAGGAGTATCTAAGGGTGACATTAGACACGGTGGCTCCATCTGCTGGTTTACCTCCTGTTGGTGCAATTGAAGAGATGGACAAGGTTATTGGTGAAGTCTTTAAGATGGTGAATGCAGATGATGCGAAGGTGGTGAAAGAAGACGAGTTCAAGAAACTATTAACTGAAATACTGGGGAGCATAATGTTGCAGTTGGAGGGAAATCCCATATCAGTTTCTTCAAATTCGGTAGTGCACGAGCCACTAGACTCATCTTCTACACTTCTGCAGCCATCCCCTAGTGAAACAGCAGCATAG 1131 0.4306 METVWGSLSRKKSGGNGQLLDASNIMELVENQQVFTTLVDHKFHRQRCQTLCQTPPTCCSHSTNPHSHHIYFEVSLSLYSLMSSFSFLLLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMVSIFSQIESPDRSLHDHIIEALGKLTVEQGIPPTSDSWVLSNIVEPALLSQDGSDLDKPVSQETFLEEFKIVAMSVANHLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKTLSSAIETLPKDRNGKLSKEYLRVTLDTVAPSAGLPPVGAIEEMDKVIGEVFKMVNADDAKVVKEDEFKKLLTEILGSIMLQLEGNPISVSSNSVVHEPLDSSSTLLQPSPSETAA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00223 376 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 374 - -
Gma12g00223 376 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 374 - -
Gma12g00223 376 SUPERFAMILY EF-hand 78 346 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00223 Gma-Chr12 1755804 1759656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00223 18 374 EF-hand Containing Proteins AT4G38810 58.556 1.23e-142 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00223 - - gmx:100794455 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00223 12 1755804 1759656 Gma12g00223 12 1755804 1759656 ECH
Gma12g00223 12 1755804 1759656 Gma11g00897 11 7559938 7564640 GST