Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00897 ATGGAGAGAGGTTCGGGCAAGCTGAGCAGGAAGAAAAGTGGTGGTGGAAACGGACAGGTTCTAGACGGTTCTAATATTATGGAGTTGGTTGGAAACCAGCAAGTTTTCACCACCTTCGTGGACCATAAGTTTCACGAGTTAGACACAGACAAAGATGGCAAACTCTCTGTCAAAGAGCTCCAGCCTGCTGTTGCTGACATAGGAGCTGCTCTTGGTTTGCCTGCTCACGGCACTAATCCTGATTCTGATCACATCTATTCCGAGGTGTTGAATGAATTCACACATGGGAAGCAGGAAAACGTGAGCAAGAGTGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGTATGGCTGCTGGACTGAAGCGTGATCCAATTGTGATACTTCGCATTGATGGAGAAGATCTTTTGGAGTTTGTTAATGGTTCAGGTTATGAAGCTGAAATGAATTCCATATTCTCTCAGATTGAGTCCCCTAACAGATCACTTCATGATCATATAATTGAAGCTCTTGGCAAGCTCACTGTTGAACAAGGAATtcctcctacatcagattcttggGTTTTGAGCAACATTATGGAACCCGCACTGCTATCTCAAGCTGGCTCTGATTTGGATAAGTCCGTTTCTCAAGAGACATTTTTGGAGGAATTTAAGATAGTGGCAATGAGTGTGGCTAATCGTCTTAAGGAGCAACCTGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACtattatccaacaagtttgaattggacaagATTTTGAACTCAGCCATGGAGACTATGCCAAAAGATCGAAATGGAAAGCTTTCAAAGGAGTATCTAAGGGTGGCACTGGACACGGTGGCTCCATCTGCTGGTTTACCTCCTGTTGGTGCAATTGAAGAGATGGACAAGGTTATTGGTGAAGTCTTTAAGATGGTGAATGCAGATGATGCGAAGGTGGTGAAAGAAGACGAATTCAAGAAACTATTAACTGAAATACTGGGGAACATAATGTTGCAGTTGGAGGGAAATCCCATATCAGTTTCTTCAAATTCGGTAGTACACGAGCCACTAGACTCTTCTTCTACACTTCTGCAGCCATCCCCTAGTGAAACAGCAGCATAG 1131 0.4191 MERGSGKLSRKKSGGGNGQVLDGSNIMELVGNQQVFTTFVDHKFHELDTDKDGKLSVKELQPAVADIGAALGLPAHGTNPDSDHIYSEVLNEFTHGKQENVSKSEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMNSIFSQIESPNRSLHDHIIEALGKLTVEQGIPPTSDSWVLSNIMEPALLSQAGSDLDKSVSQETFLEEFKIVAMSVANRLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKILNSAMETMPKDRNGKLSKEYLRVALDTVAPSAGLPPVGAIEEMDKVIGEVFKMVNADDAKVVKEDEFKKLLTEILGNIMLQLEGNPISVSSNSVVHEPLDSSSTLLQPSPSETAA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00897 376 ProSiteProfiles EF-hand calcium-binding domain profile. 35 70 IPR002048 GO:0005509
Gma11g00897 376 SMART efh_1 307 335 IPR002048 GO:0005509
Gma11g00897 376 SMART efh_1 39 67 IPR002048 GO:0005509
Gma11g00897 376 SMART efh_1 261 289 IPR002048 GO:0005509
Gma11g00897 376 ProSitePatterns EF-hand calcium-binding domain. 48 60 IPR018247 -
Gma11g00897 376 Gene3D - 145 346 - -
Gma11g00897 376 Gene3D - 5 121 - -
Gma11g00897 376 SUPERFAMILY EF-hand 43 346 IPR011992 -
Gma11g00897 376 MobiDBLite consensus disorder prediction 1 21 - -
Gma11g00897 376 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 374 - -
Gma11g00897 376 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 374 - -
Gma11g00897 376 ProSiteProfiles EF-hand calcium-binding domain profile. 257 292 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00897 Gma-Chr11 7559938 7564640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00897 19 374 EF-hand Containing Proteins AT4G38810 69.638 3.12e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00897 - - gmx:100820516 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00223 12 1755804 1759656 Gma11g00897 11 7559938 7564640 GST