Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02461 ATGGGAGAAACCGGTATCATTCTCAGCTTCCCCGGAAACTTAGACCCGAGAGCAGAAGAGTTCAGACCCAACACCATAAATATTCAATGCCAATGGTACcctcttcctcctcctcttcctcttcctcttccCATACCCCTCCCTCCTCCTAACCTCACCAcctcctccacccgctccctcctcctcaccccggtccctcTCACCTCCCACTCCGCCCTCCGAGCCGAGCTCCAGGCCTTCGGAGACATCAGAGCCCTCCAAACCGAAGCCCTCCGCCACGGCATTCTCACCGTCCACTTCTTCGACCTCCGCCATGCACAATCCGCCTTCGCCGCCATCCGCTCCATGCAACTCCACTTCCACCCCAACCCTGGCCTCCTCTCTGCCCACTACGTCCTCCCTAACTCCAACTCCCTCCCCGACTCCCACAACCAAGGCACCCTCGTCATCTTCAACCTCCACCCCAACCTCTCCTCCGACCAACTCCGTCGTCTCTTCCAACCTTTCGGTCCCATAAAGGAATTGAGAGATACCCCATGGAAAAAGAATCAAAGATTCGTGGAGTTCTTCGACATAAGAGACGCCGCCAAGGCCTTGAAACACATGAACGGCAAGGAAATTGACGGCAAACAGGTTGTTATTGAGTTCAGTAGACCCGGTGGTCACACCCGTAAGTTCTTCCATCATCATTCCAAAACCACAGTACCTCCTCTCAATTTCAATGCTCCTCGCTTGCATTCCTCTCAGAAGAAATCACCGGGAAGTCCCAGCAATAGTACGGGATCTATTGATGCGGAAATGGGGTCAATGAGTTTGACCGGAGGAGAAGTTGAAGAGCAGCATTCTTCTTCACAAGGCCCCACGCGGAGGAATCTTGGCAGAAAGCACACCACACTAGTAGTAGGAAACACCAAGCAACAACAAGTACCTAGAAGTAGGCACTGGAAGGGAAAACAAGCGAAGAAACACGAAACTCGGTTTCTAATCAAAGAGGACGCCATTGTAGAATCTGGTCCCAAAGATACTAGAACTACTGTCATGATCAAAAACATTCCCAACAAGTACAGCCAGAAGTTGCTATTAAACATGCTGGATAACCATTGCAGACACTGCAACGAGCAGATTGCAGACGGCGAAGAGCAGCAGCCTCTGTCCTCCTACGACTTCGTGTACCTCCCCATTGATTTCAACAACAAGTGCAACGTGGGATATGGGTTTGTGAACATGACATCCCCGGAGGCAACACTCAGGCTCTACAAGGCCTTCCATCTTCAACATTGGGAGGTTTTCAATTCAAGAAAAATCTGCGAAGTCACCTATGCTAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCACTTTAAGAACTCAAAGTTCCCATGTGAGATGGAGCATTACTTGCCAGTGGTGTTTTCACCGCCTCGAGATGGGAAAGAACTGACGGAGCCACTTCCACTAGTGGGGAACAAGCAGCAGCAGCAGCAACAAGCCATTCCAATTCCAATCTCAAGTGGCGGTGATGGTGACGTGGCTAGCAGCAAAAGTGGCGGCGTAGGTGGTGATGATGAGACAAATGAAGAAGAAGTGGCCTAG 1590 0.483 MGETGIILSFPGNLDPRAEEFRPNTINIQCQWYPLPPPLPLPLPIPLPPPNLTTSSTRSLLLTPVPLTSHSALRAELQAFGDIRALQTEALRHGILTVHFFDLRHAQSAFAAIRSMQLHFHPNPGLLSAHYVLPNSNSLPDSHNQGTLVIFNLHPNLSSDQLRRLFQPFGPIKELRDTPWKKNQRFVEFFDIRDAAKALKHMNGKEIDGKQVVIEFSRPGGHTRKFFHHHSKTTVPPLNFNAPRLHSSQKKSPGSPSNSTGSIDAEMGSMSLTGGEVEEQHSSSQGPTRRNLGRKHTTLVVGNTKQQQVPRSRHWKGKQAKKHETRFLIKEDAIVESGPKDTRTTVMIKNIPNKYSQKLLLNMLDNHCRHCNEQIADGEEQQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHLQHWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPCEMEHYLPVVFSPPRDGKELTEPLPLVGNKQQQQQQAIPIPISSGGDGDVASSKSGGVGGDDETNEEEVA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02461 529 PANTHER TERMINAL EAR1-LIKE 1 35 506 - -
Gma11g02461 529 PANTHER RNA BINDING PROTEIN 35 506 - -
Gma11g02461 529 MobiDBLite consensus disorder prediction 477 529 - -
Gma11g02461 529 Pfam RNA recognition motif 2 343 454 IPR007201 -
Gma11g02461 529 Gene3D - 276 446 IPR012677 -
Gma11g02461 529 CDD RRM3_EAR1_like 343 445 IPR034458 -
Gma11g02461 529 MobiDBLite consensus disorder prediction 234 267 - -
Gma11g02461 529 MobiDBLite consensus disorder prediction 227 322 - -
Gma11g02461 529 SMART rrm1_1 147 215 IPR000504 GO:0003723
Gma11g02461 529 SMART rrm1_1 345 430 IPR000504 GO:0003723
Gma11g02461 529 Gene3D - 140 227 IPR012677 -
Gma11g02461 529 SUPERFAMILY RNA-binding domain, RBD 147 423 IPR035979 GO:0003676
Gma11g02461 529 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 146 219 IPR000504 GO:0003723
Gma11g02461 529 MobiDBLite consensus disorder prediction 275 310 - -
Gma11g02461 529 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 148 212 IPR000504 GO:0003723
Gma11g02461 529 MobiDBLite consensus disorder prediction 485 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02461 Gma-Chr11 39902590 39904914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02461 - - gmx:100802212 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00114 18 914500 917446 Gma11g02461 11 39902590 39904914 GST