Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02334 ATGGCGGCCGCCAACGCTCCGATCGCCATGAGAGAAACTCTCACCTTGCCGACCATTGGCATTAATCCGCAGTTCATCACGTTCACGCATGTGACAATGGAGTCCGATAAGTATATTTGCGTTCGAGAAACGGCTCCGCAGAATAGTGTGGTTATCATTGATATGAACATGCCGAATCAGCCTTTGAGGAGGCCTATTACCGCAGATTCCGCTCTTATGAATCCGAATTCCAGAATCCTTGCTTTGAAAGCTCAACTCCAAGGAACAACTCAAGATCACCTACAAATTTTTAACATTGAAATGAAAGCAAAGATGAAATCTTATCAGATGCCTGAGCAGGTGGTCTTTTGGAAGTGGATTACCCCCAAGTTGTTGGGTATTGTAACACAGACCTCTGTATACCATTGGTCAATTGAAGGTGACTCTGAACCTGTAAAGATGTTTGAGAGAACAGCGAATTTGGCAAACAACCAAATAATTAATTATAGATGTGATCCTTCTGAAAAATGGTTGGTCTTGATTGGTATTGTTCCAGGTTCCCCTGAGAGGCCACAATTGGTTAAAGGAAACATGCAACTCTTCTCTGTGGAACAACAGCGGAGCCAGGCTCTTGAAGCACATGCTGCATCATTTGCTCAATTCAAAGTTCCTGGGAATGAAAATCCATCTACTTTGATTTCTTTTGCCACTAAAACACTTAATGCTGGTCAAATTATATCCAAGTTGCATGTTATTGAGCTGGGTGCACAGCCAGGGAAGCCATCATTTTCCAAGAAACAAGCAGATCTTTTCTTTCCTCCAGATTTTGCTGATGATTTTCCAGTTGCCATGCAGATATCCCACAAATACAGTTTGATTTATGTGATTACCAAACTTGGTCTCCTATTTGTCTACGATTTGGAGACAGCTACAGCTGTATATAGGAACAGAATTAGTCCAGATCCTATATTTTTGACATCAGAAGCTACGTCAGTTGGAGGCTTTTATGCCATTAATAGGAGAGGCCAGGTGTTATTGGCTACTGTTAATGAGCAAACAATCGTGAATTTTGTCAGTGGTCAGCTAAACAATTTGGAGCTAGCAGTTAATCTCGCCAAGAGAGGAAATCTTCCTGGTGCTGAGAAACTGGTGGTAGAACGTTTCCATGAACTGTTTGCCCAAACCAAGTATAAAGAAGCAGCTGAGCTTGCTGCTGAGTCTCCACAAGGAATCCTTCGCACACCTGATACAGTTGCCAAATTTCAGAGTGTTCCTGTGCAAGCTGGGCAAACTCCTCCACTATTGCAGTATTTTGGAACACTTCTAACAAGAGGAAAGCTGAATGCCTTTGAGTCATTGGAATTGTCACGGCTGGTTGTGAACCAGAACAAGAAAAATCTTTTGGAGAATTGGTTGGCAGAGGACAAGCTTGAATGCAGTGAGGAGCTAGGAGATCTTGTAAAGactgtggataatgatcttgccttaaaaatatacatcaaagccagagctactccaaaagttgttgctgcttttgctgagagaagggagtttgacaagattctgatatactctaagcagGTTGGGTACACGCCTGACTATCTCTTCCTTTTGCAAACAATTCTCCGGACAGATCCTCAGGGTGCTGTTAATTTTGCATTAATGATGTCGCAAATGGAGGGAGGTTGCCCAGTTGATTACAACACCATAACTGATCTGTTTCTTCAGAGAAATCTGATCCGTGAGGCAACAGCTTTTCTGCTAGATGTTCTGAAACCAAATCTACCAGAACATGGGTACCTTCAAACTAAGGTGTTGGAGATAAATCTAGTTACTTTCCCAAATGTTGCTGATGCAATTTTGGCTAATGGAATGTTCAGCCATTATGACCGTCCTCGTATTGCTCAACTTTGTGAAAAAGCTGGTCTTTATGTGCGATCTTTGCAAcattacacagagttgccagatataaaacgtgtaattgtaaatacacatgcaattgagccacagtcactcgttgaattttttggtactctgtcacgagaatgggcattagagtgcatgaaagatctattgctggtcaatcttagaggcaacctacagattattgtgcaggttgctaaagaatattgtgaacaattgggcgttgatgcttgcataaagctttttgagcagttcaggtcatatgaagggctgtattttttcctgggatcatatttgagctccagTGAGGATCCTGACATTCACTTTAAGTACATTGAAGCAGCTGCAAAGACTGGACAAATCAAAGAGGTTGAGCGTGTGACTAGAGAATCAAGTTTCTATGATCCTGAGAAAACAAAGAACTTTCTAATGGAAGCTAAGCTTCCAGACGCACGACCTCTAATTAATGTTTGTGACCGGTTTGGATTTGTTCCGGATCTAACACACTATCTATACACAAGCAACATGCTTCGTTACATTGAAGGTTATGTTCAGAAGGTGAACCCAGGGAATGCTCCTTTAGTCGTTGGGCAGCTTTTAGATGATGAATGCCCAGAAGATTTTATCAAAGGCTTGATTCTCTCTGTTCGTTCCTTACTGCCAGTGGAGCCTCTTGTGGAGGAGTGTGAAAAGAGGAATCGGCTTCGTTTGCTCACACAGTTTTTGGAACATCTTGTAAGTGAGGGAAGCCAGGATGTACATGTTCACAATGCACTGGGTAAAATCATCATTGATAGCAACAACAATCCAGAACATTTTCTCACTACCAACCCATACTATGAttctcgagttgtgggcaaatattgtgagaaacgtgatcccaccttggcagttgtagcttataggcggggacaatgtgacgacgaacttatcaatgtgacaaacaaaaattctttgttcaaactacaagcaagatatgttgttgagaggatggatggtgatctttgggagaaagttcttaaccctgataatacctacagaaggcaacttattgatcaggttgtatctacagctcttcctgaaagcaagaGCCCCGAACAAGTATCTGCAGCTGTTAAGGCTTTCATGACTGCTGATCTACCTCACGAATTGATTGAGCTTCTTGAGAAGATTGTGCTTCAGAATTCTGCATTCAGTGGGAACTTTAATCTGCAGAATCTGCTTATTTTAACGGCAATAAAGGCTGATCCGTCCAGAGTTATGGATTATATTAATAGACTAGATAATTTTGATGGGCCTGCAGTTGGAGAAATGGCTGTTGAGGCTCAGTTATATGAGGAAGCATTTGCAATTTTCAAGAAGTTCAACTTAAATGTCCAAGCAGTCAATGTCTTGCTAGATAATATTCATAGCATTGATAGAGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTTTGGAGTCAGGTGGCCAAGGCTCAACTAAGGGAAGGGCTAGTAAGTGATGCCATTGAGTCCTTTATACGAGCTGATGATGCCACACAATTTTTAGATGTTATCCGTGCTGCTGAAGATGGCAATGTTTACCATGACTTGGTGAGATACTTGCTGATGGTAAGGCAGAAGACAAAAGAACCCAAGGTGGACAGTGAGCTCATTTATGCATATGCAAAGATTGATAGGCTAAGTGACATTGAGGAGTTCATTCTTATGCCAAATGTAGCCAATCTTCAAAATGTTGGTGACCAATTGTATGATGAAGAACTATATGAGGCTGCCAAAATCATATTTGCCTTTATATCTAACTGGGCCAAGTTAGCAGTTACACTTGTGAAGTTGAAACAGTTCCAAGGTGCAGTTGATGCAGCAAGGAAAGCTAACAGTGCAAAAACATGGAAGGAAGTTTGCTTTGCATGTGTTGACGCAGAGGAGTTCCGTTTGGCCCAGATATGTGGGCTTAACATTATTATTCAGGTGGATGACTTGGAAGAGGTCAGTGAATATTACCAAAATAGAGGTTGCTTCAATGAGCTAATATCCCTCATGGAGAGTGGTTTAGGATTAGAACGGGCACATATGGGTATCTTTACAGAGTTAGGAGTTCTGTATGCTAGATATCGTTATGAGAAGCTCATGGAGCATATCAAACTATTTGCGACCCGACTCAATATTCCAAAACTCATAAGAGCTTGTGATGAACAACAACATTGGAAGGAGCTGACCTATTTGTACATCCAATATGATGAGTTTGATAATGCTGCAACAACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTGTTGTCAAAGTTGCTAATGTAGAGTTGTATTACAAGGCTGTTCACTTCTATTTACAAGAGCATCCAGATCTTATCAATGATGTTTTGAATGTCCTTGCACTTCGTGTTGATCATGCACGTGTTGTTGACATCATGCGAAAGGCTGGTCATCTCCGTCTTGTCAAGCCTTACATGGTTGCAGTTCAGAGTAACAACGTGTCTGCTGTTAATGAAGCCCTGAATGAAATATATGTTGAGGAGGAAGACTATGATAGATTGCGCGAGTCAATTGATTTGCATGATAACTTTGACCAAATAGGCCTTGCACAGAAGATTGAAAAGCATGAGCTTCTTGAGATGAGACGTGTCGCTGCTTATATTTACAAGAAGGCAGGTAGATGGAAACAGTCCATTGCCTTGTCAAAGAAAGATAACCTTTACAAAGATGCCATGGAGACAGCCTCACAATCTGGTGACCGTGAACTTGCTGAGGAGTTGCTTGTTTATTTCATTGATCAGGGAAAGAAAGAATGCTTTGCCTCGTGTCTATTTGTTTGCTATGATTTGATCCGGGCAGACATTGCTCTTGAGTTGGCCTGGATGAACAATATGATTGACTTTGCCTTCCCATATCTCCTGCAGTTTATCCGTGAGTACACTGGCAAAGTTGATGAACTGGTGAAGGATAAAATAGAAGCGCAGAACCAAGTGAAAGCTAAAGAGCAAGAAGAGAAGGAAGTAATTGCTCAACAGAATATGTATGCTCAGTTGTTGCCTCTTGCTTTGCCTGCACCGCCAATGCCTGGAATGGGAGGAGGCTTTGCCCCTCCCCCTCCAATGGGTGGATTGGGGATGCCTCCAATGCCACCTTTTGTGGTAAGAGGAAGACCGCTCTTTGTGGCTATCCATGGTTGGGCTTTGAAAGTCACTAAGAAGATGACCATATCTTTAAACCCCATCGTCAGCTTCAGCTCAACGAAGTTGGAAACAAAGTATCAGGATGCATCAAGATATTCTGTTGGAGCTTCTTTACCAAAGGCAACCCAGTTTACACCTTTGTTGATAGTGTCTAGATCGAGAAAGCTTGTCAAGGAAAGAAGATTTGGTCCTTGTTTTTCAGTGGCAGATAGTGATCAGCTTGCAGCAGACAACAGTAGTAGCAAGGATTTTGACAATGCTGAAAATTCGGCAACCAATGATCAGTCAGCATCCGTGAATTCCCCAGATGAAAACTTCCAATTGCAAACCGAAGTAAATGCGGAGTCAGGATCTCCAACATTAGAGGCTTCCATTTCCAATGGTTCAATTAACCAAGAGCAAAGGTCAGAAGCATCTCCTAAGTCACAATCTGCAACCAAACGAGCTTCCCTGACTGCAAGAGAGAGGTTAAAGGCAGCTCGATCCATCAACCGATACGCGCAATCAAAAGCATCTAAGCCAGACATGAGCAGCAGGGTGTTGGAGGCTTCAAAACAAAGTGACAAAGGGTCAGGGAAGAAAAAATCTGGACTTCCAGAGGCCCCTACTAATTTGTTTGATGATAGCAAACGAGGGTTGTCAACAGGCTTCACTTTCCAATTTCCTGGAGGTTCTGATCTCTTTTTCATTATCTTCTCATTTGTTTTTATCAGCACAGTGATGTTTGCAACAACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTCAATGAGTACTGA 5901 0.3759 MAAANAPIAMRETLTLPTIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWITPKLLGIVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIVPGSPERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKVPGNENPSTLISFATKTLNAGQIISKLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRSLQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFRSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKVLNPDNTYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRAAEDGNVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDQLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRYEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIDQGKKECFASCLFVCYDLIRADIALELAWMNNMIDFAFPYLLQFIREYTGKVDELVKDKIEAQNQVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPPMGGLGMPPMPPFVVRGRPLFVAIHGWALKVTKKMTISLNPIVSFSSTKLETKYQDASRYSVGASLPKATQFTPLLIVSRSRKLVKERRFGPCFSVADSDQLAADNSSSKDFDNAENSATNDQSASVNSPDENFQLQTEVNAESGSPTLEASISNGSINQEQRSEASPKSQSATKRASLTARERLKAARSINRYAQSKASKPDMSSRVLEASKQSDKGSGKKKSGLPEAPTNLFDDSKRGLSTGFTFQFPGGSDLFFIIFSFVFISTVMFATTYIVWKVGAIHFNEY 1966
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02334 1966 Coils Coil 1477 1497 - -
Gma11g02334 1966 Pfam Clathrin-H-link 369 434 - -
Gma11g02334 1966 Pfam Clathrin, heavy-chain linker 344 367 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma11g02334 1966 Gene3D - 1 377 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma11g02334 1966 SUPERFAMILY ARM repeat 1196 1531 IPR016024 -
Gma11g02334 1966 MobiDBLite consensus disorder prediction 1870 1912 - -
Gma11g02334 1966 Gene3D Tetratricopeptide repeat domain 1197 1536 IPR011990 GO:0005515
Gma11g02334 1966 Gene3D Tetratricopeptide repeat domain 903 1056 IPR011990 GO:0005515
Gma11g02334 1966 Gene3D Tetratricopeptide repeat domain 1057 1196 IPR011990 GO:0005515
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1437 1580 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 PANTHER CLATHRIN HEAVY CHAIN RELATED 1 1687 - -
Gma11g02334 1966 SUPERFAMILY ARM repeat 345 500 IPR016024 -
Gma11g02334 1966 Gene3D - 1542 1638 - -
Gma11g02334 1966 MobiDBLite consensus disorder prediction 1784 1809 - -
Gma11g02334 1966 Pfam Clathrin propeller repeat 154 197 IPR022365 -
Gma11g02334 1966 Pfam Clathrin propeller repeat 20 56 IPR022365 -
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 993 1138 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Coils Coil 1617 1651 - -
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1142 1283 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 551 697 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 MobiDBLite consensus disorder prediction 1872 1892 - -
Gma11g02334 1966 SUPERFAMILY ARM repeat 901 1066 IPR016024 -
Gma11g02334 1966 SUPERFAMILY ARM repeat 1053 1195 IPR016024 -
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 847 986 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 PIRSF CHC 3 1681 IPR016341 GO:0016192|GO:0032051|GO:0071439
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1288 1434 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 1288 1434 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 1142 1283 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 847 986 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 1437 1596 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 551 693 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 700 842 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SMART CLH_2 993 1138 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 MobiDBLite consensus disorder prediction 1821 1858 - -
Gma11g02334 1966 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 700 842 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 MobiDBLite consensus disorder prediction 1821 1857 - -
Gma11g02334 1966 Pfam Region in Clathrin and VPS 850 983 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 1147 1281 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 1440 1579 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 701 840 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 993 1131 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 1292 1431 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 Pfam Region in Clathrin and VPS 557 690 IPR000547 GO:0006886|GO:0016192
Gma11g02334 1966 SUPERFAMILY ARM repeat 457 793 IPR016024 -
Gma11g02334 1966 SUPERFAMILY Clathrin heavy-chain terminal domain 5 343 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Gma11g02334 1966 PANTHER CLATHRIN HEAVY CHAIN 1 1687 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma11g02334 Gma-Chr11 38753773 38769176 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02334 K04646 - gmx:100802224 3238.36
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00242 18 1959793 1971628 Gma11g02334 11 38753773 38769176 ECH
Gma11g02334 11 38753773 38769176 Gma11g02334 11 38753773 38769176 ECH
Gma18g00241 18 1955321 1957593 Gma11g02334 11 38753773 38769176 GST