Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02293 ATGACGGAGGATCGGAACGTGCGGAAGACACGTGTGGTCGACCTGGTCCTCGACTGTGTCATCCCTTACATCGACGACCCCAAGGACCGCGACGCCGTCTCACAGGTCTGCCGACGCTGGTACGAACTCGACTCCCTCACTCGGAAGCACGTCACCATCGCGCTCTGCTACACCACCACGCCGGCGCGCCTCCGCCGCCGCTTCCCGCACCTTGAGTCGCTCAAGCTCAAGGGCAAGCCCCGAGCAGCAATGTTCAACTTGATACCCGAGGATTGGGGAGGCCACGTCACCCCATGGGTCAAGGAGATTTCTCAGTACTTCGATTGCCTCAAGAGTCTCCACTTCCGCCGTATGATTGTCAAAGATTCCGATCTTCGGAATCTCGCTCGTGACCGCGGCCACGTGCTTCACTCTCTCAAGCTTGACAAGTGCTCCGGTTTCACCACCGATGGTCTTTTCCATATCGGTCGCTTTTGCAAGAGTTTAAGAGTCTTGTTTTTGGAGGAAAGCTCAATTGTTGAGAAGGACGGAGAATGGTTACACGAGCTTGCTTTGAATAATACAGTTCTTGAGACTCTCAATTTTTACTTGACAGATATTGCTGTTGTGAAGATTCAGGACCTTGAACTTTTAGCTAAAAATTGCCCCAACTTAGTGTCTGTGAAACTTACTGACAGTGAAATACTGGATCTTGTGAACTTCTTTAAGCATGCCTCTGCACTGGAAGAGTTTTGTGGAGGCACCTACAATGAAGAACCAGAAAAATACTCTGCTATATCATTACCAGCAAAGTTATGTCGATTGGGTTTAACATATATTGGAAAGAATGAGTTGCCCATAGTGTTCATGTTTGCAGCCGTACTAAAAAAATTGGATCTCCTCTATGCAATGCTAGACACGGAGGATCATTGCATGTTAATCCAAAAGTGTCCAAATCTGGAAGTCCTTGAGACAAGGAATGTAATTGGAGACAGAGGGTTAGAGGTTCTTGGTCGTTGTTGTAAGAGGCTAAAAAGGCTTAGGATTGAAAGGGGTGATGATGATCAAGGAATGGAGGATGAAGAAGGTACTGTGTCCCATAGAGGGCTAATCGCCTTGTCACAGGGCTGTTCAGAGCTTGAATACATGGCTGTTTATGTGTCGGATATTACAAATGCATCTCTGGAACATATCGGAACTCACTTGAAGAACCTCTGCGATTTTCGCCTTGTGTTGCTTGACCACGAAGAGAAAATAACTGATTTGCCACTTGACAATGGGGTGAGGGCTCTACTGAGGGGCTGTAACAAGCTGAGGAGATTTGCTCTATATCTCAGGCGTGGCGGGTTGACCGATGTAGGTCTTGGTTACATTGGACAGTACAGTCCAAATGTGAGATGGATGCTGCTTGGTTATGTGGGGGAGTCTGATGCAGGGCTTTTGGAATTCTCTAAAGGGTGTCCTAGTCTTCAGAAACTAGAAATGAGAGGGTGTTCATTTTTCAGTGAACGTGCACTTGCTGTGGCTGCAACACAATTGACTTCTCTTAGGTACTTGTGGGTGCAAGGGTATGGTGTATCTCCATCTGGACGTGATCTTTTGGCAATGGCTCGCCCCTTTTGGAACATTGAGTTAATTCCTTCTAGAAAGGTGGCTATGAATACCAATTCAGATGAGACGGTAGTTGTTGAGCATCCTGCTCATATTCTTGCATATTATTCTCTTGCAGGGCAGAGATCAGATTTTCCAGATACTGTTGTGCCTTTGGACACTGCCACATGCGTTGACACCTAG 1773 0.4721 MTEDRNVRKTRVVDLVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVKEISQYFDCLKSLHFRRMIVKDSDLRNLARDRGHVLHSLKLDKCSGFTTDGLFHIGRFCKSLRVLFLEESSIVEKDGEWLHELALNNTVLETLNFYLTDIAVVKIQDLELLAKNCPNLVSVKLTDSEILDLVNFFKHASALEEFCGGTYNEEPEKYSAISLPAKLCRLGLTYIGKNELPIVFMFAAVLKKLDLLYAMLDTEDHCMLIQKCPNLEVLETRNVIGDRGLEVLGRCCKRLKRLRIERGDDDQGMEDEEGTVSHRGLIALSQGCSELEYMAVYVSDITNASLEHIGTHLKNLCDFRLVLLDHEEKITDLPLDNGVRALLRGCNKLRRFALYLRRGGLTDVGLGYIGQYSPNVRWMLLGYVGESDAGLLEFSKGCPSLQKLEMRGCSFFSERALAVAATQLTSLRYLWVQGYGVSPSGRDLLAMARPFWNIELIPSRKVAMNTNSDETVVVEHPAHILAYYSLAGQRSDFPDTVVPLDTATCVDT 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02293 590 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 585 - -
Gma11g02293 590 SMART LRR_CC_2 428 454 IPR006553 -
Gma11g02293 590 SMART LRR_CC_2 480 504 IPR006553 -
Gma11g02293 590 SMART LRR_CC_2 133 158 IPR006553 -
Gma11g02293 590 SMART LRR_CC_2 370 394 IPR006553 -
Gma11g02293 590 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 585 - -
Gma11g02293 590 Pfam F-box 10 50 IPR041567 -
Gma11g02293 590 SUPERFAMILY RNI-like 87 400 - -
Gma11g02293 590 Gene3D - 2 48 - -
Gma11g02293 590 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Gma11g02293 590 SUPERFAMILY RNI-like 362 517 - -
Gma11g02293 590 Gene3D Ribonuclease Inhibitor 49 586 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02293 Gma-Chr11 38291170 38295394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02293 K13463 - gmx:732662 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02293 11 38291170 38295394 Gma11g02293 11 38291170 38295394 ECH
Gma18g00281 18 2346995 2351014 Gma11g02293 11 38291170 38295394 GST
Gma11g02293 11 38291170 38295394 Gma14g00527 14 5060816 5066544 PCT
Gma11g02293 11 38291170 38295394 Gma02g02401 02 50067087 50071662 PCT
Gma14g00527 14 5060816 5066544 Gma11g02293 11 38291170 38295394 PCT
Gma02g02401 02 50067087 50071662 Gma11g02293 11 38291170 38295394 PCT