Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01651 ATGACAAAGAAAATACGTTTGGATTGTTCCTTGCAGGAGGATGAAGAGAAAGTGAATAATAGCTTTGTTGAATTGGATACAAGGGAAGGAGTGAATGATGGTTTTCCTAGAGTTGGACCAAATGATTCGCTTCTTCCTGGTCTTTTTGATGATGTTGCGCTGAATTGTCTTGCTTGGGTTAATAGATCGGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACTTGCTGATTAGGAGCGGGTATCTATTTGAGTTGAGGAAGAAGTTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGTGTTTGACCCCAAGAGGAATAGATGGATAACATTACCTAAGATACCTTGTGATGAGTGCTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTCGGGAAATGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTCTCGTGGTTGGGTTAAGTGTAAGGAGATGAACCATCCTCGCTGCTTGTTCGGATCTGGCAGTCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCAGCAGAGTTGTATGACTCAAATTCAGGTACATGGAAACTATTGCCAAACATGCATACACCACGAAGATTGTGCTCTGGCTTTTTTATGGATGGAAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACGGTTTCATTGACTTGTGGGGAGGAGTATGACCTTAAGACGAGAAACTGGCGGAAAATAGAGCGTATGTATCCATATGTTAATGGGGCTGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAACCAGTTGTATGCGGTTGAGCATCTAACCAACATGGTGAGGAAATATGACAAGGAAAGGAACACCTGGAGTGAATTGGGAAGGCTTCCAGTACGTGCCGATTCTTCTAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGAGTGGACAAAGGAGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGGACAGGAGTCAGGAATGGAACCATAGATTGGCAAGTACTTGGTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGATGGTTTGGTGAAGTGCTTTTAGATTGA 1194 0.4322 MTKKIRLDCSLQEDEEKVNNSFVELDTREGVNDGFPRVGPNDSLLPGLFDDVALNCLAWVNRSDYASLACINKRYNLLIRSGYLFELRKKLGIVELEHLVYLVCDPRGWEVFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGREMMDFAIWKYSLISRGWVKCKEMNHPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSNSGTWKLLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIERMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVRKYDKERNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVSGQRSPEGEAVVLNSWCPRTGVRNGTIDWQVLGVKEHVGVFVYNCAVMGWFGEVLLD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01651 397 Gene3D - 100 371 IPR015915 GO:0005515
Gma11g01651 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 34 389 - -
Gma11g01651 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Gma11g01651 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Gma11g01651 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Gma11g01651 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Gma11g01651 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Gma11g01651 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 34 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01651 Gma-Chr11 17863137 17865429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01651 48 267 Miscellaneous Gene Families AT4G33900 25.909 3.55e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01651 - - gmx:100792139 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01651 11 17863137 17865429 Gma11g01651 11 17863137 17865429 ECH
Gma12g00606 12 5097394 5099225 Gma11g01651 11 17863137 17865429 GST