LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g01578	ATGGCATCAGCATTATCTTCTCTCTCCTCCACCTCTTCTTCACTGTTACAGCACAGTTTCACCGGAAACTCGAAGGCTCCTCCCACTACTCAATTCCCCAACAAAAATGTACGCTTTTCGGTCTTCGCTCAAAAGAAGGCAAAGAAACTTCGAAAGATTATTTTGAAGGAAGATGTGGCTTATGTAGGAAAGCAAGGGCAACTTCTTGATGTGAAGGCTGGCTTTTTCAGAAATTACCTGCTTCCTATGGGAAAAGCACAACTTGTTACTCCACAGCTTCTCAAGGAAATGAAGATAGAAGAAGAAAGAATTGAGGCTGAGAAAAAACGGGTAAAAGAAGAGGCACAGCAACTTGCTCTAATTTTTGAAACTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATTTTTGGAAGTGTCACTGCTCAAGATCTTGTTGACATAATCAAGGCACAACTTCAAAGGGAGGTGGACAAGAGAATTGTTGATCTTCCAGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCGGAAGTTACGGCTAGAGTGAGGGTGAATGTTTTTGCTAACTGA	597	0.4188	MASALSSLSSTSSSLLQHSFTGNSKAPPTTQFPNKNVRFSVFAQKKAKKLRKIILKEDVAYVGKQGQLLDVKAGFFRNYLLPMGKAQLVTPQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVRVNVFAN	198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g01578	198	Gene3D	-	52	111	IPR036935	-
	Gma11g01578	198	PANTHER	50S RIBOSOMAL PROTEIN L9	1	198	IPR000244	GO:0003735\|GO:0005840\|GO:0006412
	Gma11g01578	198	Coils	Coil	94	121	-	-
	Gma11g01578	198	Hamap	50S ribosomal protein L9 [rplI].	51	198	IPR020594	GO:0003735\|GO:0005840\|GO:0006412
	Gma11g01578	198	TIGRFAM	L9: ribosomal protein bL9	52	197	IPR020594	GO:0003735\|GO:0005840\|GO:0006412
	Gma11g01578	198	Gene3D	-	112	198	IPR036791	-
	Gma11g01578	198	PANTHER	50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC	1	198	-	-
	Gma11g01578	198	SUPERFAMILY	L9 N-domain-like	52	107	IPR009027	-
	Gma11g01578	198	SUPERFAMILY	Ribosomal protein L9 C-domain	110	197	IPR036791	-
	Gma11g01578	198	Pfam	Ribosomal protein L9, N-terminal domain	52	97	IPR020070	-
	Gma11g01578	198	ProSitePatterns	Ribosomal protein L9 signature.	63	90	IPR020070	-
	Gma11g01578	198	Pfam	Ribosomal protein L9, C-terminal domain	113	196	IPR020069	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g01578	Gma-Chr11	16958805	16962116	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g01578	K02939		-	gmx:100500279	327.405

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma11g01578	11	16958805	16962116	Gma11g01578	11	16958805	16962116	ECH
	Gma12g00727	12	6538314	6541351	Gma11g01578	11	16958805	16962116	GST