Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01227 ATGCATCTGGCTTCCCTCATAAATCCAACTTCTAATTTTCCATTACTCTCAAGCCGCACAACCACCACCTCTTTCATTTTCAACCATAGAAGAAAAAAATCACAGTCCAATTGCATTAGGAGCCACCAGTCCACAATACAGCAGAGGTGGACTCTTCAGGGCATGACAGCTCTCGTCACTGGTGGTACTCGCGGAATTGGGCACGCCATTGTGGAGGAATTGACGGGGTTTGGAGCCAGAGTGCATACCTGTGCCAGGAATGAACATGATCTCACCAAGTGCCTCAAGAATTGGAATGATTCCGGTTTTGATGTCACTGGCTCAGTTTGTGATGTCTCAGTTCCACACCAGAGGGAGGCACTCATGGAGTCTGTTTCCTCTCTCTTCCACGGGAAACTCAACATCCTTATAAACAATGTTGGTACAAACATTCGGAAACCAGTGACAGACTTCACAAGTGCAGAGTTTTCTACTCTTATTGATACGAATTTGGGATCCGTCTTTCATTTATGCCAACTTGCATATCCACTTCTGAAAGCATCGGGAATGGGAAGTGTTGTGTTTGTCTCATCTGTTTCTGGTTTTGTCTCACTCAAGTCAATGTCTGTTCAAGGAGCAACGAAAGGGGCAATTAATCAACTAACAAGAAATCTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAAAACTTCATTGGTAGAGCAGGTGCTCAGCAACAAAGATTATCTGGAAGAAGTGTACTCCAGAACTCCTCTTAGGCGCCTAGGAGATCCAGCAGAAGTCTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTATTGATGGAGGAATGTCCGTGAATGGTTTCTACCCAACAACACAGTTCTAA 924 0.4437 MHLASLINPTSNFPLLSSRTTTTSFIFNHRRKKSQSNCIRSHQSTIQQRWTLQGMTALVTGGTRGIGHAIVEELTGFGARVHTCARNEHDLTKCLKNWNDSGFDVTGSVCDVSVPHQREALMESVSSLFHGKLNILINNVGTNIRKPVTDFTSAEFSTLIDTNLGSVFHLCQLAYPLLKASGMGSVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSLVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICIDGGMSVNGFYPTTQF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01227 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Gma11g01227 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 IPR002347 -
Gma11g01227 307 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 56 73 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 178 194 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 204 223 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 225 242 IPR002347 -
Gma11g01227 307 PRINTS Glucose/ribitol dehydrogenase family signature 260 280 IPR002347 -
Gma11g01227 307 PANTHER TROPINONE REDUCTASE 30 305 IPR045000 GO:0016491
Gma11g01227 307 Pfam Enoyl-(Acyl carrier protein) reductase 63 297 - -
Gma11g01227 307 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 30 305 - -
Gma11g01227 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 299 IPR036291 -
Gma11g01227 307 Gene3D - 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01227 Gma-Chr11 10457667 10460700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01227 46 301 Miscellaneous Gene Families AT2G29290 62.500 7.30e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01227 K08081 - gmx:100799534 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01227 11 10457667 10460700 Gma11g01227 11 10457667 10460700 ECH
Gma12g00526 12 4365165 4372366 Gma11g01227 11 10457667 10460700 GST