Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01181 ATGATAAAGCCTCAAGTGTATCAATCACAGAACACCAATCAAACCCTCTTGTTTCTGCAGAGGCTATCCGTTCACAGCAGTACTGCATCTCTTCCACTATGGTTGGGGAGTAAAGTGCAGAGGCAAAAAAAGCTTAACCACCTCGTTCTGGTTTCACGCAACGTTGAAACTAATTCCACTACAACAGATACTCATACAGATAAGAGTACAGTGATTAAGGTTAAGGCCATAGTTAAGGTGAAAGTAACCGTGGGTGGTTTCTTCTCAAGTCTGAGGTTAGACCGAGGAATCGATGATATAACAGATTTGCTTGGTAAATCTCTCCTCTTAGAGCTTGTTAGCTCTGAGCTTGATCCTGTGACGGGGCTAGAGAAGGAAACACTGAAAGCATATGCACACAAAGCAGGAAATGGCGAGGAGTCGGTTAAGTACGAAGCTAAATTTGAAGTTCCAAATGATTTTGGGGAGATTGGTGCTGTTCTTGTTGAGAATGAGCATCACAAGGAGATGTTCCTTGAAACAATCCACCTCGATGGCTTCCCTGAGGGTCCTATTAATTTTCATTGTGCCTCTTGGGTTCACTCCAAGTTCGATAATCCTACCAAAAGGGTTTTCTTCTCCGACAAGTGTTACTTACCGCGAGAGACACCGAGTGGTTTAAGAAGACTACGTGAAGAAGAATTGAGTCATCTGAGAGGGAATGGAGAAGGAGAACGGAAGAGCTTTGAAAGAATATACGATTATGATATATACAATGACATTGGAGATCCTGATAAAAGCCTTGAACTTCAAAGACCTCCTTTAGGAGGTAAAGAGCGACCTTATCCTAGACGTTGTCGAACTGGTCGTCCACATAGTGAAGCAGATCCATTGTCAGAGAAAAGAAGTAGAAATTTTTACGTTCCAAGGGACGAGTGCTTCTCAGAGGTGAAGCAGCTCACGTTCTCAACCAAGACATTACACTCGGTGTTGCTAATATTGCTCCCAACTTTGGGGAAAATTATCAAAGAAAAGGAGCTTGCATTTTCCTACTTCCACGACATAGATTCACTCTTCAGCCATGGACTTGACTTGCCTCCCGAAGAAACCGAGAAGGGTTTCCTAGGAAAAATCATGCCCAGGCTCGTCAAATCCATCTCTGGCGACAGGACACACGTGCTTCGCTTCGAGACCCCAGAGACTATGAGCAGGGACAGGTTTTTCTGGTTTAGGGATGAGGAGTTTGCTAGACAGACTGTTGCTGGTCTCAACCCGTATAGTATACGATTGGTCACAGAATGGCCATTGAGGAGTAAACTTGACCCAGAAATATATGGTCCACCAGAATCAGCAATCACCTCAGAAATTATCAACAAAGAGATTGGAGGCATAATGTCTGTAGAAAAGGCGATTGAAAAAAAGAAGCTGTTCATGTTAGACTACCATGACATACTTTTACCCTACGTCAACAAAGTACGCAAACTCAAGGGGAAAACACTGTATGGTTCACGAACTTTGTTCTTTCTAAACTCAGAGGGGACACTGAGGCCTCTAGCCATTGAGTTGACTCGACCGCCGTCATCTTCAAATAATACGGGCCAATGGAAGCAAGTTTTCACACCTTCTTGGCACTCAACCAGTGTTTGGCTCTGGAGGTTTGCCAAGGCTCATGTTCTTGCACATGACTCTGGCTATCACCAACTTGTTAGTCATTGGTTAAGAACTCACTGTGTGACAGAGCCGTATGTTATTGCAACCAACAGGCAACTTAGTGAGTTGCACCCCATATACAAATTGCTACACCCTCATTTCCGTTATACAATGGAGATTAACGCTATCGCACGAGAAGCACTTATCAACGCTGATGGCACCATTGAGAGCTCATTTGCACCAGGAAAGTACTCCATAGAGATTAGCTCTGCTGCTTATGCTCTCGAATGGCGGTTTGACAAGCAGGCACTACCAGCAGATCTAGTTAGCAGGGGAATGGCTGTGAAAGATCCATTTTCTCCACATGGCTTAAAGCTCACCATTCAAGACTATCCTTTTGCCAATGATGGACTCCTTCTGTGGGATGCTATAAAGCTATGGGTCACTGACTATGTCAACCACTACTACCCTGAACCAAGTCTTGTGGAGTCAGACGAAGAGTTGCAGGCATGGTGGACAGAGATTAGAACACTTGGTCATGCTGACAAAAAAGACGAGCCATGGTGGCCACGTCTTAAAACCCCAAAAGACCTCATTGGAATCCTCAACACAATCATATGGGTAACTTCTGGTCACCATGCAGCTGTGAACTTTGGGCAATATGTTTATGGGGGATATTTCCCAAATAGGCCTACAATTGTCAGGACCAAAATGCCCTCAGAGGACCCTACAGAGGAAGAGTGGAAAAAGTTCATTGCAAACCCTGAAAGAGCACTCCTCAAGTGCTTTCCTTCACAACTTCAAGCAACTAGAGTCATGGCTGTCTTGGACATACTCTCAACTCATTCACCTGATGAGGAATACATAGGAGAGAAGATGGAACCATCATGGGGTGAAGATCCTGTCATAAAGGATGCCTTTGAAAGATTTAGAGAAAGACTGAAGAAATTAGAAACACTGATTGATGAGAGGAATGAAAACACAAAGTTGAAGAACAGAAATGGAGCTGGCATTGTTCCGTACGAGCTTTTGAAACCTTTCTCAAAGCCTGGTGTGACTGGAATGGGGGTTCCCTGTAGTATATCTATTTAA 2721 0.4403 MIKPQVYQSQNTNQTLLFLQRLSVHSSTASLPLWLGSKVQRQKKLNHLVLVSRNVETNSTTTDTHTDKSTVIKVKAIVKVKVTVGGFFSSLRLDRGIDDITDLLGKSLLLELVSSELDPVTGLEKETLKAYAHKAGNGEESVKYEAKFEVPNDFGEIGAVLVENEHHKEMFLETIHLDGFPEGPINFHCASWVHSKFDNPTKRVFFSDKCYLPRETPSGLRRLREEELSHLRGNGEGERKSFERIYDYDIYNDIGDPDKSLELQRPPLGGKERPYPRRCRTGRPHSEADPLSEKRSRNFYVPRDECFSEVKQLTFSTKTLHSVLLILLPTLGKIIKEKELAFSYFHDIDSLFSHGLDLPPEETEKGFLGKIMPRLVKSISGDRTHVLRFETPETMSRDRFFWFRDEEFARQTVAGLNPYSIRLVTEWPLRSKLDPEIYGPPESAITSEIINKEIGGIMSVEKAIEKKKLFMLDYHDILLPYVNKVRKLKGKTLYGSRTLFFLNSEGTLRPLAIELTRPPSSSNNTGQWKQVFTPSWHSTSVWLWRFAKAHVLAHDSGYHQLVSHWLRTHCVTEPYVIATNRQLSELHPIYKLLHPHFRYTMEINAIAREALINADGTIESSFAPGKYSIEISSAAYALEWRFDKQALPADLVSRGMAVKDPFSPHGLKLTIQDYPFANDGLLLWDAIKLWVTDYVNHYYPEPSLVESDEELQAWWTEIRTLGHADKKDEPWWPRLKTPKDLIGILNTIIWVTSGHHAAVNFGQYVYGGYFPNRPTIVRTKMPSEDPTEEEWKKFIANPERALLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIKDAFERFRERLKKLETLIDERNENTKLKNRNGAGIVPYELLKPFSKPGVTGMGVPCSISI 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01181 906 Gene3D - 538 905 - -
Gma11g01181 906 PANTHER LIPOXYGENASE 49 905 - -
Gma11g01181 906 PANTHER LIPOXYGENASE 49 905 IPR000907 GO:0016702|GO:0046872
Gma11g01181 906 Gene3D PLAT/LH2 domain 37 211 - -
Gma11g01181 906 Coils Coil 850 870 - -
Gma11g01181 906 Pfam PLAT/LH2 domain 141 206 IPR001024 GO:0005515
Gma11g01181 906 SUPERFAMILY Lipoxigenase 212 906 IPR036226 -
Gma11g01181 906 ProSitePatterns Lipoxygenases iron-binding region signature 2. 586 596 IPR020834 GO:0016702|GO:0046872
Gma11g01181 906 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 210 906 IPR013819 GO:0016702|GO:0046872
Gma11g01181 906 Gene3D - 212 310 - -
Gma11g01181 906 MobiDBLite consensus disorder prediction 257 294 - -
Gma11g01181 906 Gene3D - 401 536 - -
Gma11g01181 906 PRINTS Lipoxygenase signature 541 558 IPR013819 GO:0016702|GO:0046872
Gma11g01181 906 PRINTS Lipoxygenase signature 559 576 IPR013819 GO:0016702|GO:0046872
Gma11g01181 906 PRINTS Lipoxygenase signature 579 599 IPR013819 GO:0016702|GO:0046872
Gma11g01181 906 SMART LH2_4 76 208 IPR001024 GO:0005515
Gma11g01181 906 ProSitePatterns Lipoxygenases iron-binding region signature 1. 559 573 IPR020833 GO:0016702|GO:0046872
Gma11g01181 906 ProSiteProfiles PLAT domain profile. 87 207 IPR001024 GO:0005515
Gma11g01181 906 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 73 211 IPR036392 GO:0005515
Gma11g01181 906 MobiDBLite consensus disorder prediction 271 294 - -
Gma11g01181 906 Pfam Lipoxygenase 219 889 IPR013819 GO:0016702|GO:0046872
Gma11g01181 906 PRINTS Plant lipoxygenase signature 177 195 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 203 224 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 242 258 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 274 293 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 339 360 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 387 403 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 426 445 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 494 518 IPR001246 GO:0016491
Gma11g01181 906 PRINTS Plant lipoxygenase signature 819 833 IPR001246 GO:0016491
Gma11g01181 906 Gene3D - 311 399 IPR027433 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01181 Gma-Chr11 10030240 10039604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01181 150 906 Acyl Lipid Metabolism Gene Families AT3G45140 59.658 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01181 K00454 - gmx:100786646 1795.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01181 11 10030240 10039604 Gma11g01181 11 10030240 10039604 ECH
Gma11g01181 11 10030240 10039604 Gma12g00483 12 4019938 4027854 ECH