Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01175 ATGACGGTAGCAGCAGGAATCGGTTACGCTCTGGTAGCACTAGGACCCTCTCTCTCCCTCTTCGTTTCCGTCATTTCCAAAAAACCCTTCCTCATTCTCACAGTTCTCTCCAGTACGTTGTTGTGGCTTATTAGTTTGATTGTGCTGTCTGGAATATGGAGGGGGGTTTTGCCTCTCAGCACAACAGCTTCGTGGCCTTTTGGAATACTCATTTTCTCATCTGTTGCTTTTCAAGAAGCCCTCAGACTTTTCTTCTGGAAAATATATAAGAGGTTAGAAGACATGTTAGATGCCTTTGCTGACAGAGTATCAAAACCACATCTTCACCTGACAGATAAGATGCTGATTGCTCTGGCTGGTGGGTTGGGTCATGGTGTTGCCCATGCTGTGTTCTTCTGCATCAGCCTATTAACTCCTGCATTTGGTCCAGCAACGTATTTCGTTGACCGCTGTTCAAGAGTTCCATTTTTCCTTCTTTCTGCAATTATTGCTCTTGCATTTGTCATAATCCACACTTTCTCAATGGTCATCGCATTTAACGGGTATACAGAGGGGAACAAAGTGGATCAATATTTTGTTCCCATCGTTCACGTTGTTGCTGGAATGGTGCTGTTGTCCAGCTAA 624 0.4439 MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLSTTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAGGLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLSAIIALAFVIIHTFSMVIAFNGYTEGNKVDQYFVPIVHVVAGMVLLSS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01175 207 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 203 - -
Gma11g01175 207 Pfam Aph-1 protein 2 203 IPR009294 GO:0016021|GO:0016485|GO:0043085
Gma11g01175 207 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 203 IPR009294 GO:0016021|GO:0016485|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01175 Gma-Chr11 9908734 9911902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01175 K06172 - gmx:100783660 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01175 11 9908734 9911902 Gma11g01175 11 9908734 9911902 ECH
Gma12g00477 12 3890725 3894015 Gma11g01175 11 9908734 9911902 GST