Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01126 ATGACAAACGCACACGGTGGCGCCATGTTAGTAGAGCGAAATACAAACAGCACCGTACGCAGACAAAAATTCGGAGCCTTGTTGCACTCCGAACCGACGTCGCTTTCCACCTCCAACAACGACGATGATGAATTCTCCCATAACCAACAACGGCACAGCAACGCCAGCCCCAGAAACTACGCCGATAGCAGCACCACAAGCAGCAACAATGCCTCTCCCAACACCATGTCTCCGTGGAGCTACCAACCCAACAACAACTCTTCTTCTCCTCTCGATAAATCTCCGTGGATATTGCCTTCTTCACCGGCGATAAACCACTTCCACCACCACCATGACGATACCGAAAACGGCCTCTTCGGATCTATCGTCCGCCAGGAGGGCCACATATATTCCCTCGCCGTTTCCGGGGACTTGCTTTACACCGGCTCCGACAGCAAGAACATAAGAGTGTGGAAGGATCTCAAAGACTTCGCGGGATTCAAATCAAGCAGCGGATTGGTGAAAACGATTGTTATCTCCGGCGGGAAGATCTTCACCGGCCATCAAGACGGGAAGATCAGAGTGTGGAAGGTTTCGTCGAAGAATCCGCGCAACCATAAACGTATCGGGAGCTTGCCGACGTTCAAAGAGTACGTGAAGAGTTCGATGAATCCGAAGAACTACGTGGAGGTTCGGCGGCACCGGAACGCGGTGAAGGTGAAGCACTTCGACGCCGTTTCGAGCCTGAGTTTGGACGAGGAGGAAGGGTTGTTGTACTCGGGGTCGTGGGACAAGACGCTCAAGGTGTGGCGCGTGGAGGATTCAAAGTGCTTGGATTCGATTAACGCGCACGAGGACGCCGTGAACGCGGTGGTGGCGGCGTTCGGAGGGTGCGTGTTGACGGGCTCCGCGGACGGGACGGTGAAGGTATGGAGGAGGAAGAACGACGGGAAGAAGGCCAAGCACGTGCTGGACCGCGTTTTGCTGAAGCAGGAGAACGCGGTTACGGCGCTGGCGGTGAACCGTTTGGCAAAAGTGGTTTATTGCGGTTCTTCTGATGGGTTGGTGAATTTCTGGGAGTGTGACCAGAAAGGCGGGTTCTCACACGGCGGCGTTTTGAGGGGGCATAAGCTCGCTGTTCTCTGTCTCGCTGCGGCGGGGAACCTTGTCTTTAGTGGCTCCGCAGATAAGAATGTTTGCCTGTGGAAGCGTGACGAACATGGGTTCCACACGTGCCATTCGATTCTGACGGGGCACACTGGTCCTGTTAAGTGTATTGCTGTGAGGGAAGAAAAACCGCCCCCGGAGGAGCCTTGCGAGAAGAAGGATCAACGGTGGTTTGTGTACACCGGGAGCTTGGACAAGTCCGTGAAGGTGTGGTGCGTGTCTGAACAAGCGCCGGAGGCGAGCATGTTCCAAAGCTGGGCCACACCGGGTCATGCCGGTTCACCGGGGAAAATTAGTGTTAGTTCATCACCTGCGTGGAGTTATTCATCGCCGAGAAGAATTGGTGTTACTTCCGCAACAGGTGGATTCGGCTATTCCTCACCCGGATCTATCAGGATACCAGCAGAAAATGTTATTGTGAATGGAGAGCCTCTTGATTGGGATAAGCTCACTTTGCTTTTGACCTGTTCAAACCCACCAAAAGGATTGAAACCCGGTTTCTATTGGTATGATAAAGCATCTGGATTTTGGGGGAAGGAAGGTCAACGGCCAAGTCAAATTATTTGCCCACGGTTGGAGGTTGGGGGCAACTTGGAGAGAAATGCAAGCAATGGAAAGACAAATGTAACTGTAAATGGTCGAGAGATTACCATAGAAGAGCTCTGGTTACTGAAGTGGGCAGGAGTGCCCTGTGATGGAACAACTGACTTTTGGATGAGTCATGATGGATCATACATCGAAGTGGGACAGAAAAATGTCAAGGGGCATATATGGGAGAAGTCTACAATGAAGCTAGCTTCTCTAATGCTGTCACTGCCATCAGGAACATGTACCATATTTGAACAGGCCAAGCTTCTGTATAATGTTCCTCTCTCTGAAAATGAGCGCCAAAACATCAAGCTGGTAATTCAAAGCAACTTGTATAGGTACCTTGGGTTAATACTGGAGGCGCGAGAAATTTTTGAAGAAAGTTTGTGCGAGAAAACTAACGGACAGCATTTTGATGAATCAACTTCTTCTGGGATAACTGGGGAAATTGTTGACACAACCTATTCCATTGGCCCAAGACTGAGCATTCTCCGAATGGCTACTCAAATACATGGTGTCAGGGATGCAGCCATTCAGGCCACATACAAAAGGATAAATGAAATAAAATATCTACCAAGAAGTGCGAGTTATTTTCTAGAAAGGGCTGTTGAAATTTCCAGGATAGATTATGAACCCTTGGACATGGACATCTTGTATGCTGAGGGGATAACCTTATCCAATGGCCTTTCTTCTATGGAATTTTCATATACTGTGACAGGTCATGAGGACTCATTGGACCCTGAGTATGAAGATGATCCTTCACTCAGGTACCAGCTCACCAGAGTACATCCAAAAAGCCTTGGAGAAAACTGCAAGTGA 2553 0.4994 MTNAHGGAMLVERNTNSTVRRQKFGALLHSEPTSLSTSNNDDDEFSHNQQRHSNASPRNYADSSTTSSNNASPNTMSPWSYQPNNNSSSPLDKSPWILPSSPAINHFHHHHDDTENGLFGSIVRQEGHIYSLAVSGDLLYTGSDSKNIRVWKDLKDFAGFKSSSGLVKTIVISGGKIFTGHQDGKIRVWKVSSKNPRNHKRIGSLPTFKEYVKSSMNPKNYVEVRRHRNAVKVKHFDAVSSLSLDEEEGLLYSGSWDKTLKVWRVEDSKCLDSINAHEDAVNAVVAAFGGCVLTGSADGTVKVWRRKNDGKKAKHVLDRVLLKQENAVTALAVNRLAKVVYCGSSDGLVNFWECDQKGGFSHGGVLRGHKLAVLCLAAAGNLVFSGSADKNVCLWKRDEHGFHTCHSILTGHTGPVKCIAVREEKPPPEEPCEKKDQRWFVYTGSLDKSVKVWCVSEQAPEASMFQSWATPGHAGSPGKISVSSSPAWSYSSPRRIGVTSATGGFGYSSPGSIRIPAENVIVNGEPLDWDKLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPSQIICPRLEVGGNLERNASNGKTNVTVNGREITIEELWLLKWAGVPCDGTTDFWMSHDGSYIEVGQKNVKGHIWEKSTMKLASLMLSLPSGTCTIFEQAKLLYNVPLSENERQNIKLVIQSNLYRYLGLILEAREIFEESLCEKTNGQHFDESTSSGITGEIVDTTYSIGPRLSILRMATQIHGVRDAAIQATYKRINEIKYLPRSASYFLERAVEISRIDYEPLDMDILYAEGITLSNGLSSMEFSYTVTGHEDSLDPEYEDDPSLRYQLTRVHPKSLGENCK 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01126 850 Gene3D - 223 315 IPR015943 GO:0005515
Gma11g01126 850 Gene3D - 674 799 IPR011025 GO:0007165
Gma11g01126 850 PANTHER EN/SPM-LIKE TRANSPOSON PROTEIN-LIKE 9 470 - -
Gma11g01126 850 SUPERFAMILY WD40 repeat-like 126 631 IPR036322 GO:0005515
Gma11g01126 850 Pfam WD domain, G-beta repeat 126 152 IPR001680 GO:0005515
Gma11g01126 850 Pfam WD domain, G-beta repeat 235 263 IPR001680 GO:0005515
Gma11g01126 850 Pfam WD domain, G-beta repeat 364 396 IPR001680 GO:0005515
Gma11g01126 850 Pfam WD domain, G-beta repeat 405 453 IPR001680 GO:0005515
Gma11g01126 850 Pfam WD domain, G-beta repeat 269 304 IPR001680 GO:0005515
Gma11g01126 850 MobiDBLite consensus disorder prediction 50 95 - -
Gma11g01126 850 Gene3D - 104 222 IPR015943 GO:0005515
Gma11g01126 850 Pfam G-protein alpha subunit 656 814 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma11g01126 850 PRINTS G protein beta WD-40 repeat signature 251 265 IPR020472 -
Gma11g01126 850 PRINTS G protein beta WD-40 repeat signature 292 306 IPR020472 -
Gma11g01126 850 PRINTS G protein beta WD-40 repeat signature 177 191 IPR020472 -
Gma11g01126 850 MobiDBLite consensus disorder prediction 28 43 - -
Gma11g01126 850 Gene3D - 316 504 IPR015943 GO:0005515
Gma11g01126 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 273 IPR001680 GO:0005515
Gma11g01126 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 366 396 IPR001680 GO:0005515
Gma11g01126 850 ProSiteProfiles G-alpha domain profile. 644 850 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gma11g01126 850 SUPERFAMILY Transducin (alpha subunit), insertion domain 674 798 IPR011025 GO:0007165
Gma11g01126 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 274 304 IPR001680 GO:0005515
Gma11g01126 850 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 9 470 IPR045182 -
Gma11g01126 850 SMART WD40_4 115 152 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 402 454 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 267 305 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 229 264 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 359 396 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 314 353 IPR001680 GO:0005515
Gma11g01126 850 SMART WD40_4 153 190 IPR001680 GO:0005515
Gma11g01126 850 CDD WD40 126 453 - -
Gma11g01126 850 MobiDBLite consensus disorder prediction 28 95 - -
Gma11g01126 850 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 232 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01126 Gma-Chr11 9501937 9512001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01126 233 453 Miscellaneous Gene Families AT5G08390 25.893 2.38e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01126 - - gmx:100807706 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01126 11 9501937 9512001 Gma11g01126 11 9501937 9512001 ECH
Gma12g00429 12 3521125 3524968 Gma11g01126 11 9501937 9512001 GST