Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01051 ATGGCAAGTGATTCTCTTGTGATTTCCAATGGCAATGGCAATTCCAAGTCAGAGCCGCATCCGCAGAGGACTTACCAAGCAGTAGTGGTTGCAACCAGAGATATGGGCATTTCTAAGGATGAAAAACTGCCCTGGACATTACCCACTGATCTCAATTTTTTTGAGGAGATCACTACAACAACATCTGATCCGGGGAAGAAGAATGCCGTTGTGATGGGTAGGAAAACATGGGAGAGCATCCCTCCTGAGAATAGGCCGCTTCCTGGCCGCCTTAATGTTGTTCTGACTCGCTCGGGTAGCTTTGATATTGCAACAGCTGAGAACGTTCTTATATGTGGAAGTGTGTCTTCTGCTATGGAGCTGTTGGCTTCTTCTCCTTACTGCTTATCAATTGAGAAAGTATTTCTCACAGGAGGTGGAGAGATATTTAGAGAGGCTCTTAATGCACCTGGATGTGAAGCTGCCCATATTACAGAAATTGAAGCAAGCATTGAGTGTGACACTTTTATGCCTCGAGTTAATACCTCTGTATTTCAGACATGGTATTCATCATTCCCTTTGGTGGAAGACAACCTCCGCTATTCTTTCACCACTTATGTGCGTGTAAGGAGTTTTCCACCAGAGTCCCCGGATCAGAATGCTGATCCATTTTTTGATAATAATTCAGACGCTTTGAAATTTGAGGTCAAGAAATTTTCTTTTCTTCCGAAAATGGTTTATGAGAGACATGAGGAGTTTAAGTATCTTAGGTTGGTTCAAGAAATCATTTCTGAAGGTACAACTAAGGATGATAGGACAGGGACCGGTACCTTGTCGAAATTTGGCTGCCAGATGAGGTTTAATCTGCGCAGAAACTTTCCTCTTCTAACAACAAAGAAAGTATTTTGGCGGGGGGTTATTGAAGAGCTTCTTTGGTTTATCAGTGGCTCAACAAGTGCCAAGGTGCTGCAGGAAAAAGGCATTCATATATGGGATGGCAATGCATCCAGAGACATTGGTTTGACAGACAGGGAGGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGAGCCAAGTATACTGACATGCATGCTGACTACTCCGGCCAAGGATTTGATCAGCTTTTAGATGTTATTAACAAGATAAAGCACAATCCTGATGATCGAAGGATCATTCTCTCTGCTTGGAATCCATCTGATCTTAAGTTGATGGCACTTCCACCCTGCCACATGTTTGCACAATTCTATGTAGCAAATGGGGAGCTATCATGTCAAATGTATCAGCGATCTGCCGACATGGGCCTGGGTGTCCCATTTAATATTGCATCTTATGCGCTCCTGACATGCATGATTGCTCATGTTTGTGACCTTGTTCCGGGTGATTTTATCCATGTTATCGGGGATGCACATGTTTACCGCAATCATGTGAGACCCTTGCAGGAACAGCTCCAGAACCAACCAAAACCTTTTCCGATTTTGAAGATAAACCCAAAGAAGAAAGATATAGATTCTTTTGTGGCTTCTGATTTCAAGCTCATAGGATATGTTCCTCACCAGAAGATAGAAATGAAGATGGCTGTTTAG 1575 0.433 MASDSLVISNGNGNSKSEPHPQRTYQAVVVATRDMGISKDEKLPWTLPTDLNFFEEITTTTSDPGKKNAVVMGRKTWESIPPENRPLPGRLNVVLTRSGSFDIATAENVLICGSVSSAMELLASSPYCLSIEKVFLTGGGEIFREALNAPGCEAAHITEIEASIECDTFMPRVNTSVFQTWYSSFPLVEDNLRYSFTTYVRVRSFPPESPDQNADPFFDNNSDALKFEVKKFSFLPKMVYERHEEFKYLRLVQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVIEELLWFISGSTSAKVLQEKGIHIWDGNASRDIGLTDREEGDLGPVYGFQWRHFGAKYTDMHADYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQEQLQNQPKPFPILKINPKKKDIDSFVASDFKLIGYVPHQKIEMKMAV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01051 524 PIRSF DHFR-TS 8 524 IPR012262 GO:0004146|GO:0004799|GO:0006730
Gma11g01051 524 Pfam Thymidylate synthase 247 524 IPR023451 -
Gma11g01051 524 ProSitePatterns Thymidylate synthase active site. 386 414 IPR020940 GO:0004799|GO:0006231
Gma11g01051 524 SUPERFAMILY Dihydrofolate reductase-like 23 201 IPR024072 -
Gma11g01051 524 TIGRFAM thym_sym: thymidylate synthase 247 524 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 237 524 IPR036926 -
Gma11g01051 524 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 24 201 IPR001796 GO:0004146|GO:0046654
Gma11g01051 524 PRINTS Thymidylate synthase family signature 286 307 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 PRINTS Thymidylate synthase family signature 375 394 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 PRINTS Thymidylate synthase family signature 401 416 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 PRINTS Thymidylate synthase family signature 419 445 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 PRINTS Thymidylate synthase family signature 457 474 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 Gene3D Dihydrofolate Reductase, subunit A 5 203 IPR024072 -
Gma11g01051 524 CDD DHFR 27 200 IPR001796 GO:0004146|GO:0046654
Gma11g01051 524 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 524 - -
Gma11g01051 524 CDD TS_Pyrimidine_HMase 248 477 IPR023451 -
Gma11g01051 524 PANTHER THYMIDYLATE SYNTHASE 1 1 524 IPR045097 GO:0016741
Gma11g01051 524 MobiDBLite consensus disorder prediction 1 22 - -
Gma11g01051 524 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 228 524 IPR036926 -
Gma11g01051 524 Hamap Thymidylate synthase [thyA]. 245 524 IPR000398 GO:0004799|GO:0006231
Gma11g01051 524 Pfam Dihydrofolate reductase 27 201 IPR001796 GO:0004146|GO:0046654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01051 Gma-Chr11 8936871 8940441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01051 K13998 - gmx:100786311 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00365 12 3031619 3036516 Gma11g01051 11 8936871 8940441 GST