Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00960 ATGGAGCCACGGGAGCAGGTCCATGATCAAGGATCCGAACTCAATTTGGAGGATACGGTAGTTGATAAACAATATGATGCTGAAACCGGTGTTGCATTGACTTCTGCTTTGGCGGATGGAAATACTCCAGATGCCGCGCAGGAGCCCGATTACTTTAAGGAGGCTGTTTTGGCTGATGCTGACTCTGGGAAGCTGGGGGGAGATGATGTAATTTCTGAGCAAGACTTGGAGGAAAGGGATGGGCAGGGAAGTGATAATGTTCATCTGGATGGTGTTGATTCTGGAGTGCCTGTAGATGGAGAAATTTTTGATGAATCCCATGGTGTGGGGGATGATAATCTGGAGAGTAGTGATGGGGGTGGTGGAAAGGAAGAATCTGGGTTAAATTCTGACAGAGAGATGTTAGTTCAGGAGAATGGTACTATGGTGGATGAAAATTCTGGTTTGGTGAGTGAGAGGGCTGAAATCGATGATTCTGAATTCATGACTCCTAGAGAAAATGGTGGTATGATATTTGAGAATGGAAGCACAAACAAGGTCGATGGTGTTGCTACTGAACCTATTATGGAATCTGAATCCAGTGAGGTTATTCCAGCCCAAGGTACTGATGCTGGGGATTTGAAGGAGTGTGGCTCAGATACTGAACTTGGAGATGACAAGATAGAGGTAAAGTTAAATGCTTCAGCTGATCCTTCTGGGGAGATTCAAGATGATACATCTGAAGAAGTACACGACAATTCGGCTCACATGACTTTAGAACATCAAGATGAAGTAACTAGGGATATGAAGGATGATTCTCTGGGCACTAATATGAGTCACGAGGATAGAAATGGTGAAGAAATGAGTACTGATGGCATTCAAAATACTGAAGTAAGAGATTATGGTAATGGCCATGCTGAAGCTGAAAGCTCACCACCCTTTTTGGAAAATTCCTCTACTAATCTGACACCGTCTATTCAGGAGGctagtgcagctgaaccaaaggaagcaagaaccactcAAGTGACTGGAGAGCAACATGTTCAACCTGCAGCAGATATTTCTTCTTCATCTAAAAGGTCTGCTGGTACTGTGCCTACTCCTGTCCGTCCTTCATCTGAAAATTCTCCTGCTGCTGGGCCCACTCCTGTTCATCCAACTGGCCTTGGTCGTGCAGCTCCATTACTGGAACCTGCATCTCGGGTAGTGCAGCAGCCCCGTGCTAATGGTGCCGTGTCTAATACTCAGTCCCAGCAAATGGAGGACTCCTCGAGTGGGGAGGCTGAGGAGTATGATGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTGGCTGAGCAACTCCGAGGAAGGAATGGGGGTCGTGTTGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATTATGGTCCTTGGAAAGACAGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTCATATGGGAACCAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGCATTAAGGTACGGGTCATTGATACGCCGGGACTTCTACCTTCCTGGGCAGACCAGCGAAGCAATGAGAAGATCCTCCACTCTGTTAAGCACTTTATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTCTTGCGCACAATAACTGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCTGCATCTGCTCCTCCTGAAGGCCCTAATGGTACTGCTTCCAGCTATGACTGGTTTGTTACTCAACGTTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTGGAGAACCATTCTGCTTGCAGAACAAATAGGGCTGGTCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATCTGTTACTTCTATCTTTTGCCTCCAAAATTCTGGCTGAAGCAAATGCTCTTCTCAAGTTACAAGATAGTCCACCTGGGAAGCCATATGTAGCTCGAACAAGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCAAGACCGCAGTTAAAGTTGCCAgaggagcagtttggtgatgaggacagtcttgatgatgaCCTTGGTGAATCATCAGAGTCTGATGATGAAAATGAACATGATGACTTGCCGCCATTTAAACCTTTAACTAAGGCCCAGGTGGAAGAGCTGTCTAAAGCTCATAAGAAAGCATATTTTGATGAGTTAGAGTATAGAGAAAAGCTTTTGATGAAGAAGCAATTGAAGGAAGAGAAAAAGCAACGAAAAATGTTGAAGAAAAGGGCAGAATCAGCAAAAGATCTGCCAAGTGACCATAGTGAAAATGTGGAAGAAGAAAGTGGCGGTGCAGCTTCTGTCCCTGTTCCCATGCCAGATTTGGCCCTGCCTGCTTCTTTTGATTCTGATAACCCCACTCACCGGTATCGTTATCTTGATTCGTCATCAAATCAGTGGCTTGTAAGACCTGTTTTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGGTTGAATGTAGAAAGATTGTTCGTTGTCAAGGAAAAGATTCCTTTATCTTTCTCCGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATATCCAGTTCAGTTAAGCATGGGAAAGGGAAAGCAACTTCATTAGGTTTTGATTTGCAAACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAATGCAACTGCTGGTCTCTCATTTACTTTACTTGGTGATGCCTTATCATCTGGGTTGAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAGCTTGTTGTCAGTGGTGGTGCAATGACAGGGCGGGGCGACATTGCTTATGGTGGCAGTTTGGAGGCCCAACTGAGAGATAAGGATTATCCTCTTGGTCGTTTCTTAACTACGCTTGGCCTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCAGTAGGACGACATACAAACCTTGTTGCCCGGGCAAATTTGAATAATCGAGGGGCAGGGCAAATAAGTATTCGATTAAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGTGTCATCCCTCTCCTAAAGAAGCTAGTTGGTTATCATCAACAAACGCAGTTTGGACAATACTGA 3408 0.4319 MEPREQVHDQGSELNLEDTVVDKQYDAETGVALTSALADGNTPDAAQEPDYFKEAVLADADSGKLGGDDVISEQDLEERDGQGSDNVHLDGVDSGVPVDGEIFDESHGVGDDNLESSDGGGGKEESGLNSDREMLVQENGTMVDENSGLVSERAEIDDSEFMTPRENGGMIFENGSTNKVDGVATEPIMESESSEVIPAQGTDAGDLKECGSDTELGDDKIEVKLNASADPSGEIQDDTSEEVHDNSAHMTLEHQDEVTRDMKDDSLGTNMSHEDRNGEEMSTDGIQNTEVRDYGNGHAEAESSPPFLENSSTNLTPSIQEASAAEPKEARTTQVTGEQHVQPAADISSSSKRSAGTVPTPVRPSSENSPAAGPTPVHPTGLGRAAPLLEPASRVVQQPRANGAVSNTQSQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWADQRSNEKILHSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDWFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYVARTRAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLGESSESDDENEHDDLPPFKPLTKAQVEELSKAHKKAYFDELEYREKLLMKKQLKEEKKQRKMLKKRAESAKDLPSDHSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKEKIPLSFSGQVTKDKKDANVQMEISSSVKHGKGKATSLGFDLQTVGKDLAYTLRSETRFTNFRRNNATAGLSFTLLGDALSSGLKIEDKLVASKRFKLVVSGGAMTGRGDIAYGGSLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALIGVIPLLKKLVGYHQQTQFGQY 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00960 1135 MobiDBLite consensus disorder prediction 827 852 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 400 417 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 66 86 - -
Gma11g00960 1135 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 322 1129 IPR045058 -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 208 225 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 62 385 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 237 281 - -
Gma11g00960 1135 Pfam AIG1 family 502 635 IPR006703 GO:0005525
Gma11g00960 1135 ProSiteProfiles AIG1-type G domain profile. 499 728 IPR006703 GO:0005525
Gma11g00960 1135 MobiDBLite consensus disorder prediction 760 780 - -
Gma11g00960 1135 Pfam Translocase of chloroplast 159/132, membrane anchor domain 860 1124 IPR024283 -
Gma11g00960 1135 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 379 1128 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Gma11g00960 1135 CDD Toc34_like 474 719 - -
Gma11g00960 1135 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 322 1129 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 132 146 - -
Gma11g00960 1135 Coils Coil 815 842 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 755 788 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 400 426 - -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 827 873 - -
Gma11g00960 1135 Gene3D - 470 719 IPR027417 -
Gma11g00960 1135 MobiDBLite consensus disorder prediction 305 373 - -
Gma11g00960 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 495 636 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00960 Gma-Chr11 8141886 8145845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00960 - - gmx:100810931 2013.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00288 12 2291306 2295641 Gma11g00960 11 8141886 8145845 GST