Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00937 ATGGCGAATGGTGAGGGAAGCGACATTGACGAAGTGAACTATGAAGAGGAAGAAAACACAGCACAGGAGGAAGATGACAATGTCATGGAAGAAGAAGAAGACGAAGAAGATGAGTACACTTTCAGGTTCAAAAACGGGATGAACCCTTTGGACTTTGTTGATGACAATGATGATTCTGGCATTCAACCCTACCAGCGATTCGTGCGTCTTGAACGGGAAGCCCTTGCTGATAAAAAGCGAAAAGCAATTGAACAATGCCATAGTGAAGAACCACCTTCTAAGATGGCTAGGGAAGGTGATGTTTCTGGGGCAAAGATAGCTGAGATAATGGAAGCAATGGATTATTATGGTGTGCGCAAGAGATCGAGAAAGCCTAAGAAGAGAGGCAGGCGAAAAGGATCAAAGAATAAAGATGACCCTAAGCTAACACAGATGCTGGGTGATGCCACGTTTCACTATGCACGTGGCGATTATGACCAGGCATGTTATTCTGCTAAAGCTGTGTTGCGTGAAGTTATTAGGCTGGCACCAAATTTGCATGAGTCGTATCACACCCTTGGACTTGTCTATACTTCACTCCAGGATTATAAAAGAGCTATGGCCTTATACTTGATTGCTGCTCATTTGGATGCAAAAGAGTCATCTCTTTGGAAAACGATTTTTACCTGGTCCATAGAACAAGGTTATGTTGATCAAGCCGGTTATTGTCTTTTAAAAGCAATAAAAGCAGATCCCAAAGATGTTACTCTTAGATGTCATCTTGCAAGGCTTTATGCTGAACTTGGACATTATCAAAAAGCTGCTGTTACATATGAGCAAGTACATAAACTATGTTGTGAGAATATTGATGCACTGAAAGCAGCAGCTAAGTTCTACAAAAAATGTGGTCAAGTTGAATACTCTGTTCGTATTCTTGAAGACTATATTAAGAGTCAACCGGATGTAGCAAATGCAAGTGTAGTTGATCTGCTGGGTACCATATTGATGGAAACTAAGGCACATGATAGAGCTCTGCAGCATATTGAACATGCTCAAGCAGTAAATGCGAGGAAAGAATTGCCTTTGAATTTGAAAATTAAGGCCGGAATTTGCCATGCTCATCTTGGAAACCTAGAGATGGCTCAGGTTCTCTTTAATGATTTGAAACCAGAGAATGCAAGCAAGCATATTGACTTGGTTACTGGGGTTGCAGACTCATTAATGGGTCTTGAACATTATAATCCTGCATTGAATTATTATTTGATGTTGGAAGGAAATGTTGAAAAAGAAAATGGTCTTCTATATCTGAAAATTGCTAGGTGTTATATGTCCTTGAAAGAAAGGTCACAAGCAATTCTCTTTTATTCCAAAGCTCTTGAAACACTACAAGATGATGTTGATGCACGCATAACTCTAGCTTCACTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCCATATTCTTGCTGTCTCCTCCAAAGGATTCTGATTTTGGTGAAGCACCTTCTGGAAAGTCAAATAGATGGTGGTTTGATATAAGAATAAAACTGAAGCTCTGCAACATTTATTGGAATAGAGGGACGCTTGATGATTTTGTGGATACAATTTTCCCTTTGATTCGTGAATCATTGTATGTTGCAACTTGTCGACAGAAGGGTAAATCAAAAAAGCGTCTCTCCAAAAGAGATCTGGTTGAAAGGGTTAGGGTTCTGGATGGTCCGGAAAAGGATAATGTATTTCGGGGATTTAGACCAGTTGCTGCACCATCTGACCTGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTCCAGAAGAAGGCAATTGAAAAGGAGAAAAGAAAAGCTGAGGCACTGGCCTCTGGAATTGACTGGCTAAGTGATGATTCAGATGATGAGCCTCAGAAAGAAAACAGAGAACCTCCCTTGTGTAATCTTCTCAAAGATGAAGAACATCACCAGCTAATAATTGATTTGTGCAAGGCATTAGCATCCTTGCAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTTTCTAAGATTGGCCCATACATCTCTGTCTACTGAAAAAAAAGAGGAGCTTCGATCTCTTGGAGCTCAAATGGCATATAACACCACAGATCCGAAACATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTGCAGCTTGGAATTGCTACTACAAGGTTATCTCAAGATTGGAAAACCGAGATACAAGACATTACAAATTTGTACGTGGTATGCAAGGAAAGTTTGTGGATTGTGTGCCTCCTATCCTTATTTCTGGGCATCAGTTTACCATATGTAGCCATCATCAAGATGCAGCAAGGAAATACCTTGAAGCTTATAAACTATTGCCAGAGAATCCTTTGGTTAATCTTTGTGTTGGAACAGCCTTGATCAACTTAGCATTGGGTTTAAGACTTCAAAATAAGCATCAATGTGTTGTACAAGGTTTAGCATTCCTCTACAATAATTTGAGAATCTGCGAGAACAGCCAGGAATCCTTGTACAACATAGCTCGGGCATTCCATCATGTTGGACTTGTAACTCTGGCGGTTATTTATTATGAGAAAGTGATTGCTATGTGCGAGAGAGACTATCCAATTCCAAAACTTCCCAATGAAAATTCAGATATCATCGAAACTCATAAACCTGGTTACTGTGACCTTCGCAGAGAGGCAGCTTACAATTTGCATTTAATCTACAAAAAAAGTGGTGCTCTTGATCTTGCTAGGCAAGTTCTCAGAGATTATTGTACCTTGTGA 2757 0.4001 MANGEGSDIDEVNYEEEENTAQEEDDNVMEEEEDEEDEYTFRFKNGMNPLDFVDDNDDSGIQPYQRFVRLEREALADKKRKAIEQCHSEEPPSKMAREGDVSGAKIAEIMEAMDYYGVRKRSRKPKKRGRRKGSKNKDDPKLTQMLGDATFHYARGDYDQACYSAKAVLREVIRLAPNLHESYHTLGLVYTSLQDYKRAMALYLIAAHLDAKESSLWKTIFTWSIEQGYVDQAGYCLLKAIKADPKDVTLRCHLARLYAELGHYQKAAVTYEQVHKLCCENIDALKAAAKFYKKCGQVEYSVRILEDYIKSQPDVANASVVDLLGTILMETKAHDRALQHIEHAQAVNARKELPLNLKIKAGICHAHLGNLEMAQVLFNDLKPENASKHIDLVTGVADSLMGLEHYNPALNYYLMLEGNVEKENGLLYLKIARCYMSLKERSQAILFYSKALETLQDDVDARITLASLLLEEGKEDEAIFLLSPPKDSDFGEAPSGKSNRWWFDIRIKLKLCNIYWNRGTLDDFVDTIFPLIRESLYVATCRQKGKSKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDLLKASRAKKLLQKKAIEKEKRKAEALASGIDWLSDDSDDEPQKENREPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINLFLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICENSQESLYNIARAFHHVGLVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIETHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLRDYCTL 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00937 918 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Gma11g00937 918 MobiDBLite consensus disorder prediction 9 38 - -
Gma11g00937 918 MobiDBLite consensus disorder prediction 119 142 - -
Gma11g00937 918 SUPERFAMILY TPR-like 759 914 IPR011990 GO:0005515
Gma11g00937 918 SUPERFAMILY TPR-like 393 729 IPR011990 GO:0005515
Gma11g00937 918 MobiDBLite consensus disorder prediction 120 134 - -
Gma11g00937 918 MobiDBLite consensus disorder prediction 1 38 - -
Gma11g00937 918 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Gma11g00937 918 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 9 917 IPR039340 GO:0006383
Gma11g00937 918 SUPERFAMILY TPR-like 152 480 IPR011990 GO:0005515
Gma11g00937 918 Gene3D Tetratricopeptide repeat domain 579 918 IPR011990 GO:0005515
Gma11g00937 918 Gene3D Tetratricopeptide repeat domain 351 524 IPR011990 GO:0005515
Gma11g00937 918 Gene3D Tetratricopeptide repeat domain 111 350 IPR011990 GO:0005515
Gma11g00937 918 Coils Coil 14 34 - -
Gma11g00937 918 SMART tpr_5 425 458 IPR019734 GO:0005515
Gma11g00937 918 SMART tpr_5 248 281 IPR019734 GO:0005515
Gma11g00937 918 SMART tpr_5 830 863 IPR019734 GO:0005515
Gma11g00937 918 SMART tpr_5 180 213 IPR019734 GO:0005515
Gma11g00937 918 SMART tpr_5 318 351 IPR019734 GO:0005515
Gma11g00937 918 Pfam Tetratricopeptide repeat 428 453 IPR019734 GO:0005515
Gma11g00937 918 Pfam Tetratricopeptide repeat 181 204 IPR019734 GO:0005515
Gma11g00937 918 Pfam Tetratricopeptide repeat 236 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00937 Gma-Chr11 7856807 7874961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00937 K15201 - gmx:100813793 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00262 12 2070179 2093760 Gma11g00937 11 7856807 7874961 GST