Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00924 ATGAGAGGGGTCGTGAAAGCGTTTGCGGGGAATCTGTTGTTCCATGGAAGAAAGACTCAGACTCAGTGCATTCGCTCCTACAGTCTGATCCCAATGGTGATAGAGCACTCTTCCCGAGGTGAGAGGGCATACGACATCTTCTCGCGCCTTCTGAAGGAGCGCATTATCTGCATCAACGGACCCATCTCCGACGACACTGCCCACGTCGTCGTTGCGCAGCTCCTCTTCCTCGAATCCGAAAATCCTTCCAAACCCATCAACATGTACCTCAATTCCCCCGGTGGCGCCGTCACCGCAGGGCTTGCTATTTATGATACGATGCAGTATATCCGGTCTCCAGTCAATACAATCTGTATGGGTCAAGCCGCATCCATGGGTTCTCTCCTTTTGGCTGCAGGTGCCAAGGGGGAGAGGCGGTCTCTTCCAAATGCAACAATCATGATTCACCAGCCTTCTGGCGGTTATAGTGGCCAGGCAAAGGATATTGCAATTCACACCAAGCACATAGTTCGGGTTTGGGATTCTTTGAATGAGTTGTATGCCAAGCATACGGGCCAGTCGGTTGAGGTTATTCAGACAAATATGGACAGGGATAACTTTATGACTCCAAAGGAGGCCAAAGAGTTTGGGCTCATTGATGAGGTCATTGATCAGAGACCTATGGCTTTGGTTTCTGATGCTGTTGGTAACGAAGGAAAAGATAAAGGTTCCAATTAG 717 0.4965 MRGVVKAFAGNLLFHGRKTQTQCIRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDIAIHTKHIVRVWDSLNELYAKHTGQSVEVIQTNMDRDNFMTPKEAKEFGLIDEVIDQRPMALVSDAVGNEGKDKGSN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00924 238 Gene3D - 16 224 - -
Gma11g00924 238 Pfam Clp protease 39 218 IPR023562 -
Gma11g00924 238 CDD S14_ClpP_2 45 215 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 ProSitePatterns Endopeptidase Clp histidine active site. 138 151 IPR033135 -
Gma11g00924 238 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 22 237 IPR023562 -
Gma11g00924 238 PRINTS Clp protease catalytic subunit P signature 45 60 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 PRINTS Clp protease catalytic subunit P signature 85 105 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 PRINTS Clp protease catalytic subunit P signature 116 133 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 PRINTS Clp protease catalytic subunit P signature 137 156 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 PRINTS Clp protease catalytic subunit P signature 194 213 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 SUPERFAMILY ClpP/crotonase 37 220 IPR029045 -
Gma11g00924 238 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 22 237 - -
Gma11g00924 238 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 29 219 IPR001907 GO:0004176|GO:0004252|GO:0006508
Gma11g00924 238 ProSitePatterns Endopeptidase Clp serine active site. 116 127 IPR018215 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00924 Gma-Chr11 7725572 7726858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00924 K01358 - gmx:100782585 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00248 12 1923606 1927449 Gma11g00924 11 7725572 7726858 GST