LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00914	ATGGTCCAACCGGCGCCGGCGATGACTCAGTTCCTCAACTCCGTCCTCTCCCAGCGCGGCCCCTCCGCCGTCCCCTACTCCGAGGACACCAAGTGGCTGATCCGCCAGCACCTCGTGGCCCTCACCACCGCCTTCCCTTCCCTCGAGCCCAAAACGGCGTCGTTCACTCACAACGACGGCCGTTCCGTCAACCTCCTCCAGGCCGACGGCACCATCCCCATGACGTTCCAAGGCGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAGTCCTACCCTCGCCACCCGCCCTGCGTCTACGTCAATCCCACGCGCGACATGATCATCAAGCGCCCTCATCCTCACGTTAACCCTTCTGGCTTGGTTTCCGTCCCTTACTTGCAGAATTGGACTTACCCTAGCTCCAACCTCGTCGATCTTATTCTCAATCTCAGCCTCCACTTCGGCCGCGACCCTCCTCTTTATTCCCAACGCAGACCTaaccctaacaccaaccccaaccccaaccccaaccccaaccctaatcccaCTCCTCATCCCCATCCTCCTCCCAATTACGGAAACTCTTCTCCCTCTAATTTATCGTCATCTTCATCTGGATATCCCCACGCCCATGCCCACCCTCCTCCAAGGACTTACCCTCCTTCCCCTTACCCTGCTCCTTCTTCTAGGGTTCAGTCCACTGAGGATCCTTCTGAGGTTTTCAAGCGCAGCGCTATTAACAAGCTTGTGGAGATGGTTCATGGCGACGTTGCCGCTTTGAGGAAGACCAGAGAAGATGAAATGGAGGGGCTGTTTAGTTTGCAGGGCGTGCTGAAACAGCGCGAGGAGAGTCTCAATAGGGGTGTGAAGGAGATGCAGCAGGAGATGGAGGCTTTGGAGCAGCAGTTACAGATGGTGTTGATGAATACTGATGTTTTGGAGGGGTGGTTGAGGGATAATCAGGGGAAGAAGATGGCCGGTTTGGAGAATCCCGAGGACGCTTTTGAGTGTGCGGATGTGCTCTCCAAGCAGATGCTTGACTGTACTGCTGCTGATTTGGCGATTGAGGACACGCTTTACGCGTTGGATAAGGCACTTCAGGTTGGAGGTGTGCCATTTGATCAGTACTTGAGGAGCGTGAGGGCCCTGTCCAGGGAGCAGTTCTTTCACCGCGCCACTGCCGCCAAAGTTAGGGCTGCTCAGCTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAGTCAGCATTATGGTTGCTGA	1242	0.5395	MVQPAPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTTAFPSLEPKTASFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLILNLSLHFGRDPPLYSQRRPNPNTNPNPNPNPNPNPTPHPHPPPNYGNSSPSNLSSSSSGYPHAHAHPPPRTYPPSPYPAPSSRVQSTEDPSEVFKRSAINKLVEMVHGDVAALRKTREDEMEGLFSLQGVLKQREESLNRGVKEMQQEMEALEQQLQMVLMNTDVLEGWLRDNQGKKMAGLENPEDAFECADVLSKQMLDCTAADLAIEDTLYALDKALQVGGVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAARSQHYGC	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00914	413	SUPERFAMILY	Endosomal sorting complex assembly domain	334	394	IPR037202	-
	Gma11g00914	413	Coils	Coil	277	304	-	-
	Gma11g00914	413	PANTHER	PROTEIN ELC-LIKE	9	171	-	-
	Gma11g00914	413	PANTHER	PROTEIN ELC-LIKE	174	411	-	-
	Gma11g00914	413	ProSiteProfiles	Steadiness box (SB) domain profile.	334	402	IPR017916	-
	Gma11g00914	413	MobiDBLite	consensus disorder prediction	153	234	-	-
	Gma11g00914	413	MobiDBLite	consensus disorder prediction	164	188	-	-
	Gma11g00914	413	PANTHER	TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED	9	171	-	-
	Gma11g00914	413	PANTHER	TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED	174	411	-	-
	Gma11g00914	413	Pfam	UEV domain	35	155	IPR008883	GO:0015031\|GO:0036211
	Gma11g00914	413	Pfam	Vps23 core domain	328	391	IPR017916	-
	Gma11g00914	413	MobiDBLite	consensus disorder prediction	208	222	-	-
	Gma11g00914	413	Gene3D	-	335	395	-	-
	Gma11g00914	413	Gene3D	Ubiquitin Conjugating Enzyme	3	156	IPR016135	-
	Gma11g00914	413	MobiDBLite	consensus disorder prediction	189	203	-	-
	Gma11g00914	413	SUPERFAMILY	UBC-like	17	155	IPR016135	-
	Gma11g00914	413	ProSiteProfiles	UEV domain profile.	15	159	IPR008883	GO:0015031\|GO:0036211

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00914	Gma-Chr11	7649315	7651174	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00914	K12183		-	gmx:100778834	694.115

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00238	12	1858666	1860403	Gma11g00914	11	7649315	7651174	GST