Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00901 ATGGGAAATGAAGGTATTATGAATGGTGTTACCCCCGGGAAGGCTACCATATTAGCTCTTGGCAAGGCTTTCCCTCATCAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGGGACACAAACTGTGACAGTCCTGAACTCAAGCAGAAGCTCACTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTATGTGGTAATGTCAGAGGAGATACTGAAAAAGTATCCAGAACTTGCGGCTGAAGGCATCCCCACAGTAAAGCAACGACTAGAGATATGCAATGAGGCAGTGACAGAAATGGCCATTGAAGCTTCCCAAGCTTGCATCAACAACTGGGGTGGATCTTTATCAGACATAACACACTTAGTTTATGTGTCATCCAGTGAAGCTAGATTACCCGGTGGTGACCTTTACCTAGCCAAAGGACTAGGACTGAGCCCTGATACTCAACGAGTCATGCTCTATTTTGCTGGTTGTTCGGGAGGCGTGGCCGGCTTACGTGTTGCGAAAGACATAGCTGAGAACAACCCTGGAAGCCGAGTGCTGATTGCTACCTCAGAAACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCTTATGATCTAGTTGGGGTGGCACTCTTTGGGGATGGTGCTGGTGCAATGATAATTGGCTCAGACCCAATATTGGAGTCTGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTTTGCCACACACTGAGAAGAAAATAGATGGGAGGCTGACAGAAGAAGGAATAAGCTTCAAGTTAGCAAGGGAACTTCCTCAAATAATTGAAGACAATGTTGAAGGATTCTGTGACAAGTTAATAAGTGTTGTTGGGTTTGAGAACAAGGAGTACAACAAGATGTTTTGGGCTGTTCATCCGGGGGGTCCTGCCATCTTGAACCGCATTGAAAAGAGGCTTGATTTGTTGCCAGAGAAGCTGAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAATGCTAGCAGTAACACCATTGTGTATGTGCTTGAGTATATGATAGAGGAAGGTCTCAAGATTAGAAAGGATGCCAGAGGAGATCTTGAATGGGGCTTAATACTTGCTTTTGGACCAGGGATTACATTTGAGGGAATTCTTGCCAGGAACTTGTGTGCTTGA 1164 0.451 MGNEGIMNGVTPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDSPELKQKLTRLCKTTTVKTRYVVMSEEILKKYPELAAEGIPTVKQRLEICNEAVTEMAIEASQACINNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRVMLYFAGCSGGVAGLRVAKDIAENNPGSRVLIATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILESEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCDKLISVVGFENKEYNKMFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEGLKIRKDARGDLEWGLILAFGPGITFEGILARNLCA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00901 387 Pfam Chalcone and stilbene synthases, C-terminal domain 235 385 IPR012328 -
Gma11g00901 387 CDD CHS_like 15 381 - -
Gma11g00901 387 SUPERFAMILY Thiolase-like 232 383 IPR016039 GO:0016746
Gma11g00901 387 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 8 385 IPR011141 GO:0009058|GO:0016747
Gma11g00901 387 SUPERFAMILY Thiolase-like 12 225 IPR016039 GO:0016746
Gma11g00901 387 PIRSF PKS_III 5 386 IPR011141 GO:0009058|GO:0016747
Gma11g00901 387 Gene3D - 7 232 IPR016039 GO:0016746
Gma11g00901 387 PANTHER BNAA09G41780D PROTEIN 8 385 - -
Gma11g00901 387 Pfam Chalcone and stilbene synthases, N-terminal domain 10 225 IPR001099 -
Gma11g00901 387 Gene3D - 233 384 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00901 Gma-Chr11 7574073 7575658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00901 83 372 Miscellaneous Gene Families AT4G34250 24.922 1.86e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00901 - - vun:114168705 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00226 12 1766425 1769447 Gma11g00901 11 7574073 7575658 GST