LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00791	ATGGCGAGCATAAAGTTATTGTCGGAGGCTGTGCGTAGCTCACTGCGTTCGGGCATTTTCCTCGTCGACTTCACGCGTGTCGTCGAGGAACTAGTTTTCAATAGCCTCGATGCTCGTGCCACAAAGGGAGAGACAGAGAAGTTAAAAGTATCGGTGTTTGTTAGTACTGGGAGCTGCTATTTGAAAGTTGTTGATGATGGAAGTGGAATCCCTCGAGATGGGATGGAAATGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGTTGACCTGAATGCCTCGAGTGAGAACTTCGGTTTTCGCGGGGAAGTTTTAGCTTCCATATCTGAAGTCTCTTTGCTGGAAATTGTGACGAAAACATATGGAAGGCCAAATGGATATCGAAAAGTATTGAAGGGGTGCAAGTGCTTATATCTTGGTATTGATGATGATAGAAAGGAAATGGGCACCACAGTTGTTATCCGTGATTTATTTTACAACCAACCAGTTCAGAGAAAATACATGCAATCCAGTCCCAATAAGGTACTGCAATCAATCAAGAACTGTGTAGTGTGGCTTGCACTCGTGTGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAGCTCTTTTGCACCCATTCTGCTTCTTCTCCTCTGTCACTTGTAACCAGTGGCTTTGGAGTAGAAGTCACAAGCTCTCTTCACAATTTAGAAGTTGAGAATGATATCATAAAGCTTTCTGGATATATATCTGGTCCTTGCAATACTGTGGATACGAAGGTGACTCATATTTCTAATTTAAAAAATGCCAACTCACAATTTGTTTGCAAGGGCCCAGTTCACAAGCTTATGCGTCAACTGGCTAATAGGTTTGAGCATCTGAACTCATGGAATACTGATGAAGAGTTCCAAAACAAGAAGAGAACCAGGTGTCAACCATGTCCAGCTTATCTCTTGAATTTGAGTTGCCCCCGATCTTTGTATGATTTGGCCTTTGAGCCATCAAAAACTGTTAAATTTAAGGATTGGGCTCCTATACTAAACTTCATTGTGAAGGCCATCAAACAATTCTGGGAGGAAAACGTAGCTTGTGATCCCTCCAATGGAGCCACATACATGGTAGAAGATCAACATCATTTTAGCAGTATCAGGGAAGATGTTGATTACTTAGGGGTCACAATTTTCAAAGAGAAACAAAGTAAGGGAGACTTTCTTCTTCAGACTGGTTATTCTGGCAACTTATTGGATGGTTCTTATGCCAAGTGCACGTCCACTGTGATGAGAAAGCATAATAGTTTGTTGATGCATAATAGCAATAGCTTATTGGAAGGTGATAACTTTTTTGATGGTGAAATTCCTGCTGTAGAAAGTTTCAACATTGATGTACCTTTTGATGCACCGAGTTCTTCACATGGAAGAAGATTCCATAAAGTAGAAGCTGATGTGATCAATGAATCATTTGAAGATGATTTGCTTTATAATAGCTGCAGTGGGTATGGTTATGATGTAAAGATTAATGAGGATTTGCAACAACCTTTTCTAAAGAGATGCTCTACGCTAGGAAGTATCCTGCATGAGAAGGCTTTGTTTGTAAATGATGAATATGAACTCCAAACTGATAGCTTTTGGAGCAAGCAGAATGCAGAGGAGGATTATAGAAGTGGTAAGGATTTATATGCCCATCCCTGTCCAGAAGTCACAAAAAAGTTAAAGATGTCTAAAGATTCTGATTTCCTCGTTAGAGCATTGTCTGAAGAAAATTGTCTCCCTCCAGATTTATGCTATTCAGCATTACAAATAGGAAGCTCTGGGTCAGATGATCAGTTGTTAAATTTTGAATGGCATCCTGACTACCAAAAACCCTCATCTCAAGCATCTGCATTGGAAATGATAGGCAACAGACAGATTGGCCGAGTGTCCAACCCTGCTTTCAATCATCAAGAAGCTAGTAATTTTAAATATCCTCAACAGTCTCCGGTTGGTCTTCACCATAGCACTGAAGAATTCTTATTGCAAGAATTCAAAATTAATGTGAAACGAACTTCAGAGGTTCTGGGAGATATGCAGGTTAACGACATTACAGATATTGATGGATTTGAAAGTTTCAACATTCAAAACAGTGCTCCATTTGGGGAATTGATCTCTAGGGGTGTGCAAGATTCCCTAGATTATGGGACTAAATGGAGGAACTGCTCACCCAAAATTACAAAGAATGATAAACTGGCTAACATTCAAAGTCAAAACAATATTCTTGACATTTCTTCTGGATTCTTGCATCTTGCTGGAGACTCATTGATTCCTGAAACTATCAGTAAGAAATGCCTTGAGGATGCTAAAGTTCTGCATCAGGTGGATAAAAAGTTCATTCTAGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAATTGTGTCAAAAGGTATTGTCAGGAGAAGCAAAAGCAATAACCTATCTAGGTGCTGAACAGGAACTGGTATTGCCGGAGATTGGTTATCAACTACTTCATAGTTATAGGGTCAAATTAAATGATGTTGATCTTTTAGAATTTCTTCAGCAGGTTGCTGACACTGATGGATCATCAACAATGCCACCATCTGTCTTACGAGTGCTAAATTTGAAAGCATGCAGAGGTGCAATTATGTTTGGGGACTCATTGCTACCATCAGAATGCTCCTTTATAGTTGAAGAGCTAAAACATACATCGCTTTGTTTCCAATGTGCTCATGGGCGACCAGCAACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAGATAGCCAAGCTTCGACTGATGAATGAGTGTTCAAGTGACGAGTGCCATGGATTACGTAGACATACAGTACGCGTTGAACGTGCAGCACAGCGTTTAAATTCTGCTAGAGGAATTTGA	2922	0.4014	MASIKLLSEAVRSSLRSGIFLVDFTRVVEELVFNSLDARATKGETEKLKVSVFVSTGSCYLKVVDDGSGIPRDGMEMVGERYATSKFLNLVDLNASSENFGFRGEVLASISEVSLLEIVTKTYGRPNGYRKVLKGCKCLYLGIDDDRKEMGTTVVIRDLFYNQPVQRKYMQSSPNKVLQSIKNCVVWLALVCPNISFKVVDIEREDELFCTHSASSPLSLVTSGFGVEVTSSLHNLEVENDIIKLSGYISGPCNTVDTKVTHISNLKNANSQFVCKGPVHKLMRQLANRFEHLNSWNTDEEFQNKKRTRCQPCPAYLLNLSCPRSLYDLAFEPSKTVKFKDWAPILNFIVKAIKQFWEENVACDPSNGATYMVEDQHHFSSIREDVDYLGVTIFKEKQSKGDFLLQTGYSGNLLDGSYAKCTSTVMRKHNSLLMHNSNSLLEGDNFFDGEIPAVESFNIDVPFDAPSSSHGRRFHKVEADVINESFEDDLLYNSCSGYGYDVKINEDLQQPFLKRCSTLGSILHEKALFVNDEYELQTDSFWSKQNAEEDYRSGKDLYAHPCPEVTKKLKMSKDSDFLVRALSEENCLPPDLCYSALQIGSSGSDDQLLNFEWHPDYQKPSSQASALEMIGNRQIGRVSNPAFNHQEASNFKYPQQSPVGLHHSTEEFLLQEFKINVKRTSEVLGDMQVNDITDIDGFESFNIQNSAPFGELISRGVQDSLDYGTKWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDKKFILVVAGRTLAVIDQHAADERIRLEELCQKVLSGEAKAITYLGAEQELVLPEIGYQLLHSYRVKLNDVDLLEFLQQVADTDGSSTMPPSVLRVLNLKACRGAIMFGDSLLPSECSFIVEELKHTSLCFQCAHGRPATVPLVNLEALHNQIAKLRLMNECSSDECHGLRRHTVRVERAAQRLNSARGI	973

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00791	973	PANTHER	DNA MISMATCH REPAIR PROTEIN MLH3-RELATED	1	931	IPR028830	GO:0006298
	Gma11g00791	973	SUPERFAMILY	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	23	209	IPR036890	-
	Gma11g00791	973	Pfam	MutL C terminal dimerisation domain	778	821	IPR014790	GO:0005524\|GO:0006298
	Gma11g00791	973	SMART	DNA_mis_repair_2	221	358	IPR013507	GO:0005524\|GO:0006298\|GO:0030983
	Gma11g00791	973	Gene3D	-	774	850	IPR042120	-
	Gma11g00791	973	Gene3D	-	877	959	IPR042120	-
	Gma11g00791	973	SMART	MutL_C_2	779	895	IPR014790	GO:0005524\|GO:0006298
	Gma11g00791	973	SUPERFAMILY	Ribosomal protein S5 domain 2-like	206	358	IPR020568	-
	Gma11g00791	973	PANTHER	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	1	931	IPR038973	GO:0006298\|GO:0016887\|GO:0032300\|GO:0140664
	Gma11g00791	973	Gene3D	-	2	215	IPR036890	-
	Gma11g00791	973	Gene3D	-	222	363	IPR014721	-
	Gma11g00791	973	SUPERFAMILY	DNA mismatch repair protein MutL	777	926	IPR037198	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00791	Gma-Chr11	6588674	6597923	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00791	K08739		-	gmx:100780255	1723.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma11g00791	11	6588674	6597923	Gma11g00791	11	6588674	6597923	ECH
	Gma01g01621	01	51897915	51908296	Gma11g00791	11	6588674	6597923	GST