Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00787 ATGTTCATAAAGAAGCTCGTGGAGAAAGCATCCATAAAGATGCCTCTTGGAAATTCATTGGATGGGTTAAAAGGTAGTGATGTAGATCCACGTTTGGTATTTCATCAAGGGGTACCATCTGGTGGTGCCAAGTTTGCCTATGACAATATTCAGAAGATACTGGCCCTATCTACCAAGGATGGACGGATTAAACTATTTGGAGAGGATAATGCCCAAGTCCTACTTGAATCTAAAGAGCCTGTGCCTAGCAAGTTTTTACTGTTCATTCAGAACCAAGGCATCCTTATAAATGTCACTTTCAATAACCATATTGAGGTTTGGGACATAGACAAGAAACTGTTGTCTGATGTGTACATTGTTAAGGAAGAAATCACTTGTTTCTCAGTCATTAAACATAGCCTCTTTATGTATATTGGATTTTCTAATGGCAATATTTCAGTTTTGATGCTTGATCAAGAACCATGGCATGTGGTACGTATGAAATACACCATACCCCTTTCAGCTTCTTATGGAAATTCAACTGAAGAATCTGACGATACAGTGGTGACACACGTACTGCCTCAACCAGCAGCCGAGAGTCAGAGAGTTCTCATAATCTTTAGAAATGGCCAAATAATATTATGGGATATTCGAGAAATCAGATCAATTTTCAGAACTGGTGGGAAAATATTGCAGACAAGATATAATGAAACAAGGAAGGTGTCTTCTGCTTGTTGGGTGTGTCCTTTTGGAAGTAAGGTGGTTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCATCCCTTCTCTAAACACAGGAAATAGTTTAGCAACTGATTATAATAGTCAAAACACTCCTATGTTCAAATTTAATTTAGGATATAAATCAGACAAAACTTCTATAGGATCAGTAAAATGGATTTATGCTGAAGGAAAGGCTAGTCGACTATATGTTATGGGAGGTTCTGATTATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGCCAGAAGGTTGTATTGACATGGAGATCATATCAACCTCAAGCAAGCATAGACAAAATTATTTCATTTTGCTTGGGAAATCAGGCCACGTATATCTATATGATGATAATTTGATTGAAAGGTATCTACTGCAAAGCCAGTCTAAGTCCAGTCCTTCACTGCCAAAGGAAGTGGTTGTGAAGTTACCACTGGCAGATTCAAACATCACAACAGCAAAATTCATCTCCAACAATTCCAATTTTTTTAGTTCTGAAGATGAGTATTACAATCAGCTGGTAAAGAATTATCCACCACTTGTTCCCATTGAAACAAATCTCAAAGATGGGATTAACTTCAGTTCTTCCAATTTCACTGGATTTTCAAACATTAGAAACATGTACATAACTGGACACAGCAATGGAGCCATAAATTTTTGGGATGCAACATGTCCCTTTTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCTTGACGGAATTATATTTTGATAGCAACTCTCCACTCCTTTTTTCTGGTGACCAAAGTGGAATGGTTCGTATCTATAGATTCAAACCTGAACCATATGCCTCGAATAGCTTCATGTCCCTTACAGGAGGTACAAAGAAAGGGACCGATCACGTAATCCACAGTATGAAACTTATAAAGACTAGTGGTACTGTAATTTGTATGAACATAGATCACAGCTCAAGGCATCTTGCTGTTGGTTCTGACCAAGGAAATGTTTCAGTTATCAACATAGATGGACCATCTTTGTTATATCGGAAACATATTGCAAGTGAAATTTCCACCGGTATCATCTCCCTGCAGTTCAAAACCTGCAGTTTGCATGGTTTTGAGAAAAACATTTTAGCAGTTGGAACAAAGGACTCGTCTGTTCTAACACTAGATGGTGAAACTGGAAACACATTGAGCATTGGAACTATTCATCCTAAGAAGCCCTCTAAAGCTATATTTATGCAGGTGTTGGATGGACAAGGAGAACAAACCGCAGGATCAGTTACAAAAGATGGCTTAGAGTTGAAAGAAGGGATTCATATTGAAGATGCAACAGCAAAGCAGTTGTACATTCTGCTGTGTTCTGAGAAGGCTTTGTATGTCTATTCTTTTGCACATGCTGTACAGGGTGTTAAAAAGGTGCTTTACAAAAAGAAGTTTCATTCCTCTTCCTGTTGCTGGGCATCAACAATTAACAGCCTCTCTGATATTCGTCTTATACTCCTTTTCGCCAGTGGAAAAGTAGAATTAAGGTCTTTCCCAGAGTTAACTCTAATAGTGGAGACTTCAGTTAGAGGTTTCACTTATTCACCTCCAAAATTGAAGTCATTTTCTGATAGCCAGATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTGGTCTCATTGTTGGCCCAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAGGAAGGAAAGGATGCCATCACAAGAAGAGCTTGTTCCTGGCCCTGTCATCCATAAGGAAAAGAAAAGGGGTATATTCAGCTCTGTTATCAAAGATTTTACTAGCAGTAAAGAAAAGCATGCACCCCTCTTGGAAAAGAAAGATCCCAAAGAAAGTATACGGGAACTCTCAGCAATATTCTCAAATGCAAACTTTGCATGTAATGATAATGTTGATAAGCCAACAATGGATGAAAATCAGCTTGAATTAAACATAGATGATATTGACCTAGAGGATCATGTAGAAAAACGCAAAGAACAAAGCATATTGGGAGCTCTTAATAAGAAGAAATTGGCTGGCACATTTCAATCTCTGAAAGGAAGATTGAAAGAGATGAAGGGAAACAACCAAAAAACATCAGTTAAGGAAGGGCAACAGGATCAAAAAGATGGTGCGCTTGATCAAATTAAGAAGAAATATGGGTTTTCTTCTTCCTCCAATGAATCAGCCGTGGCAAATCGGGCACAAGTCAAACTGCATGAAAACATAAGGAAATTGCAGCAGGGTACCAACCTTCGTGCCACAGAGATGCAAGATATAGCAAAATCATTTTCATCATTGGCCAAACAAGTGCTGCGAACTACTGAGCAGGATAGACGAAGTTGA 3162 0.3858 MFIKKLVEKASIKMPLGNSLDGLKGSDVDPRLVFHQGVPSGGAKFAYDNIQKILALSTKDGRIKLFGEDNAQVLLESKEPVPSKFLLFIQNQGILINVTFNNHIEVWDIDKKLLSDVYIVKEEITCFSVIKHSLFMYIGFSNGNISVLMLDQEPWHVVRMKYTIPLSASYGNSTEESDDTVVTHVLPQPAAESQRVLIIFRNGQIILWDIREIRSIFRTGGKILQTRYNETRKVSSACWVCPFGSKVVVGYNNGELFIWSIPSLNTGNSLATDYNSQNTPMFKFNLGYKSDKTSIGSVKWIYAEGKASRLYVMGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLPEGCIDMEIISTSSKHRQNYFILLGKSGHVYLYDDNLIERYLLQSQSKSSPSLPKEVVVKLPLADSNITTAKFISNNSNFFSSEDEYYNQLVKNYPPLVPIETNLKDGINFSSSNFTGFSNIRNMYITGHSNGAINFWDATCPFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLFSGDQSGMVRIYRFKPEPYASNSFMSLTGGTKKGTDHVIHSMKLIKTSGTVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLYRKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLTLDGETGNTLSIGTIHPKKPSKAIFMQVLDGQGEQTAGSVTKDGLELKEGIHIEDATAKQLYILLCSEKALYVYSFAHAVQGVKKVLYKKKFHSSSCCWASTINSLSDIRLILLFASGKVELRSFPELTLIVETSVRGFTYSPPKLKSFSDSQICCSSKGDLVLVNGDQEIFVVSLLAQRNIFRLLDSVSCIYRKERMPSQEELVPGPVIHKEKKRGIFSSVIKDFTSSKEKHAPLLEKKDPKESIRELSAIFSNANFACNDNVDKPTMDENQLELNIDDIDLEDHVEKRKEQSILGALNKKKLAGTFQSLKGRLKEMKGNNQKTSVKEGQQDQKDGALDQIKKKYGFSSSSNESAVANRAQVKLHENIRKLQQGTNLRATEMQDIAKSFSSLAKQVLRTTEQDRRS 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00787 1053 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1052 - -
Gma11g00787 1053 SUPERFAMILY WD40 repeat-like 361 663 IPR036322 GO:0005515
Gma11g00787 1053 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 34 603 IPR011047 -
Gma11g00787 1053 CDD R-SNARE_STXBP5_6 987 1048 - -
Gma11g00787 1053 Pfam Lethal giant larvae(Lgl) like, C-terminal 585 834 IPR013905 -
Gma11g00787 1053 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1052 - -
Gma11g00787 1053 Gene3D - 43 380 IPR015943 GO:0005515
Gma11g00787 1053 Gene3D - 442 675 IPR015943 GO:0005515
Gma11g00787 1053 SMART WD40_4 557 598 IPR001680 GO:0005515
Gma11g00787 1053 SMART WD40_4 220 260 IPR001680 GO:0005515
Gma11g00787 1053 SMART WD40_4 496 535 IPR001680 GO:0005515
Gma11g00787 1053 SMART WD40_4 398 483 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00787 Gma-Chr11 6554827 6565242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00787 - - gmx:100782049 2045.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00787 11 6554827 6565242 Gma11g00787 11 6554827 6565242 ECH
Gma11g00787 11 6554827 6565242 Gma16g01084 16 27401970 27414066 PCT
Gma16g01084 16 27401970 27414066 Gma11g00787 11 6554827 6565242 PCT