Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00773 ATGGCGGTTCCACTCAGAATGAACCACAACAAACGAGGCGGCATGCTTGCTCGCTTGAAGATTCTCGTCAACTCTCACTCTCAGAGCTTCCACTCCCCTGCGCCCAAACGACCAAAGCAAGATCAATCATCAACAGAAAATGACTTGGATTACTCTATTTGCCGGGGCCGCATTGATGTCTCAAAATGGAAGACTTTGGATGCAAAGGAACTTGGTATAACTAGTTCTATGATTTCATACCCATCTCAGTTTGTCCTGAAACTTCTTCGGAGAAAAGGTGAGATTGTATACAGGCCTTTAAAATatatcacacacacacacacacacacacacacacacacacaaatattctgGATTTGGTCCTACTTAGTAGGTGGGTGTGTGAGAGATCTACTATTGAATAAAACTCCAAAAGATTTTGATGTTATCACGACAGCAAAGCTGATGGAGAAAGCGGTTTTGTGGTTCAGCCGCGCCGAAGTTGTTGGACGTTGTTTTCCAATATGCTTGGTTCATATAAAAGGCTCTGTAGTTGAGGTAACCAGTTTTGAGACAGTGGCACGAACTTCCAATAGGAAGGAACAATTTTTACACTCTCTGTTGCCCAAATGCAGTAATAAAAAGGACTTATTTCGCTGCAAAAACTCCTTGCGCAGGGACTTCACAATTAATAGTTTATTTTATGACCCCTTTGCCAATAAAATCTACCATTATACTGATGGAATGGCTGATTTGAGGTCATTAAAGCTAGAAACTGTTATCCCTGCTCAGATGTCCTTTAAAGAGGATCCTGGTAGGGAGACTGAGGCTGCAATGTGGAAATATTCTTCACTTGTTAAGAGCTTGGACAAGAATAAAATTATGATTGAATTGAACTACATGCTGTCTTATGGAGCTTCTGAACCATCTCTGCGTCTACTTTGGAAACTCAAATTGCTTGAATTTTTACTTCCCGTGCATGCAGCATATCTTGATGAACAAGCGATCAAAGAAGATCTGACTTGGCACCTGACCAGACCCATTTCAAGAAGTACTTTTAAGAAGTGCCATCAACTCTGGCAAATAGAAACAACCAACAAGGTAAGCCAAGAAAGGAGACTGGAAGCATTTCACCTGGCATTAGTAAATAATCCTCAAGATGCTCTAGTGGTGTGGGCATTTGCTTCTGTTCTATATCATGGGGAGTGGGAAAAGGATACCCATCTTTTCCACAATCTGCCATGCTTGGGAAAAGAAAAAGCACTATGCATTTTTCTTTTGATGAAGAAATCAAGATTTGAATGTAAGCAGCCATCAGTCAATGGACATCATGTAGCTTATTGGAAATTGGAACATGGTTTGATCGAGCCATCTTTTACCTCTCTTTAA 1368 0.394 MAVPLRMNHNKRGGMLARLKILVNSHSQSFHSPAPKRPKQDQSSTENDLDYSICRGRIDVSKWKTLDAKELGITSSMISYPSQFVLKLLRRKGEIVYRPLKYITHTHTHTHTHTQIFWIWSYLVGGCVRDLLLNKTPKDFDVITTAKLMEKAVLWFSRAEVVGRCFPICLVHIKGSVVEVTSFETVARTSNRKEQFLHSLLPKCSNKKDLFRCKNSLRRDFTINSLFYDPFANKIYHYTDGMADLRSLKLETVIPAQMSFKEDPGRETEAAMWKYSSLVKSLDKNKIMIELNYMLSYGASEPSLRLLWKLKLLEFLLPVHAAYLDEQAIKEDLTWHLTRPISRSTFKKCHQLWQIETTNKVSQERRLEAFHLALVNNPQDALVVWAFASVLYHGEWEKDTHLFHNLPCLGKEKALCIFLLMKKSRFECKQPSVNGHHVAYWKLEHGLIEPSFTSL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00773 455 Gene3D - 253 380 - -
Gma11g00773 455 CDD NT_ClassII-CCAase 122 246 IPR002646 GO:0003723|GO:0006396|GO:0016779
Gma11g00773 455 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 11 398 - -
Gma11g00773 455 SUPERFAMILY Poly A polymerase C-terminal region-like 250 420 - -
Gma11g00773 455 Pfam Probable RNA and SrmB- binding site of polymerase A 267 323 IPR032828 -
Gma11g00773 455 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 11 398 - -
Gma11g00773 455 Pfam Poly A polymerase head domain 122 249 IPR002646 GO:0003723|GO:0006396|GO:0016779
Gma11g00773 455 SUPERFAMILY Nucleotidyltransferase 118 246 IPR043519 -
Gma11g00773 455 MobiDBLite consensus disorder prediction 28 48 - -
Gma11g00773 455 Gene3D Beta Polymerase, domain 2 106 252 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00773 Gma-Chr11 6458827 6465057 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00773 - - gmx:100794882 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00773 11 6458827 6465057 Gma11g00773 11 6458827 6465057 ECH
Gma01g01635 01 52071247 52078355 Gma11g00773 11 6458827 6465057 GST