Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00768 ATGATGGATACTCACGCAGAAGATTCTGCTAGACCTGAGGAGAATTTGCCTGATGTGACTCATCATAATGAAGATGGAAGCAACAGAAATCTTATATTGGAAAATGGTTTGTCTGATAGCGATCAAGGTCCTGCTGATACTCACGATCAGCTTTTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAGACAGTGTACCTAGTGACTCTAGTATACAGAAAGGAGTTGGTGGCTCTGAAGATGGGGAATCTGATATTGTGAAAGAATTAAAGGAAAAGATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCCTTGAAGCATCTTCAAACGGCTTACTCGGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCGAACGAAGTTAGACCAAGAAGTAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAGTTCAAAAGGAAAAAGATGATCTTGAGGCCCGCTTCTCTGAGGTAAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATAGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAATGCTATTGAGGCATTGCAACAGTCAATTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCTCTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATCGAGAGTTTGGAGGCTCAAATTAATGATGCATTGTCCGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACAGGAGAAGCCGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCTCACATAAAAGAGGAGCATGAAAACGAAAGGGAAAGCTGGGAGACTGCAACTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCACACAAACAAGAATCCTCAATATGAGAGATGCTGAATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGATCTAGAGGAAACTCTGAAAGAGGTGGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAGCTTGCAGAAAGAGACACAGCCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGCTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTACAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTACAAAAGATATGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCGGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCATCAGTATGTTTTTATCTGCTTTTTCAATATCACGAGACCTTGCATAAATTGGATGCAACAAATTTAAGCCCCTCCGAAGCAGAGCAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGTTAAAGGATGAGCTTCGCAATATGGAAAGATCAAAGAAAAGGGAAGGTGTTGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATACAGAAGTGTCAACAGGCATATCACAACTCAACAGATGTTCCACCAAATCCTGCAAGCGATACTTCAGGATCTGGCCTATCGCTTTTCTCAAGATTCACATTTTCTTAG 2385 0.4063 MMDTHAEDSARPEENLPDVTHHNEDGSNRNLILENGLSDSDQGPADTHDQLLQMVMDLRFQNDFLKSQFEGFKNVDSVPSDSSIQKGVGGSEDGESDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEARTKLDQEVKEREEKYSELDSKFNRLHKRAKQRIQEVQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDSDRQQLRSANNNLRDTIEDLRRSLQPKENAIEALQQSIAEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIESLEAQINDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSHIKEEHENERESWETATQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSTQTRILNMRDAELLAAKEEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKDLEETLKEVENEVLSITEERDRVLQDLQSAMANHEKELAERDTALENVKQQIRSLEIKLDSANAKHLKEKEEWGLSLQNVQETWRIRCEAMKAENEATATKDMQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRQSLQSRPSVCFYLLFQYHETLHKLDATNLSPSEAEQQILILARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAMLKDELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHNSTDVPPNPASDTSGSGLSLFSRFTFS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00768 794 Coils Coil 354 413 - -
Gma11g00768 794 Coils Coil 177 349 - -
Gma11g00768 794 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 52 771 - -
Gma11g00768 794 Coils Coil 127 172 - -
Gma11g00768 794 Coils Coil 459 546 - -
Gma11g00768 794 SMART 1grip 721 765 IPR000237 -
Gma11g00768 794 MobiDBLite consensus disorder prediction 1 28 - -
Gma11g00768 794 Pfam GRIP domain 722 761 IPR000237 -
Gma11g00768 794 Coils Coil 564 601 - -
Gma11g00768 794 Coils Coil 425 452 - -
Gma11g00768 794 Coils Coil 99 119 - -
Gma11g00768 794 MobiDBLite consensus disorder prediction 29 46 - -
Gma11g00768 794 Coils Coil 606 626 - -
Gma11g00768 794 MobiDBLite consensus disorder prediction 1 46 - -
Gma11g00768 794 ProSiteProfiles GRIP domain profile. 718 765 IPR000237 -
Gma11g00768 794 Gene3D - 229 382 - -
Gma11g00768 794 Coils Coil 669 710 - -
Gma11g00768 794 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 52 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00768 Gma-Chr11 6426933 6436354 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00768 - - gmx:100775990 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00768 11 6426933 6436354 Gma11g00768 11 6426933 6436354 ECH
Gma01g01638 01 52106240 52116822 Gma11g00768 11 6426933 6436354 GST