Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01638 ATGATGGATACTCACGCAGAAGATTCTGCTAGATCTGAGGAGAATTTTCCTGATGTGACTCATCATAATGAAGATGGAAGCAACGGAAATCTTATATTGGAAAATGGTTTGTCTGATGGCAATCAAGGTCCTGCTGATACTCATGATCAGCTTCTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAGACAGTGTACATAGTGACTCTAATATACAGAAAGGAGTTGGTGGCTTGGAAGATGGGGAATCTGACATTGTGAAAGAACTAAAGGATAAGATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCTTTGAAGCATCTTCAAACGGCTTACTCAGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTAGACCAAGAAGTAAAAGAGCGTGAAGAGAAGTACCTTGAACTTGATTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAGTTCAAAAGGAAAAAGATGATCTTGAGGCCCGCTTCTCTGAGGTGAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGTTGACAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAGTGCTATTGAGGCATTGCAACAATCAGTTGTAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCGGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATACAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCGGCATCAACAGGAGAAGCTGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGAAAGCTGGGAGACTGCTTCTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCACCCAAACAAGAATCCTCAATATGAGAGATGCCGAATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAGCTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAGAGAGGTGGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAGATTGCAGAAAGAGACACAGCCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTTGAAATAAAGCTTGACTCAGCTAATGTTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCTACTGCTACAAAAGATATGCAAAAGGAATTGGAAGAGTTCAAACAGCGATGTAAAAAACTGAAGGAAGAACATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTATAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCACCAGTCGATCAGAATGATAATTATACAACAGCCATGCATAAATTGGATTCAACAAATTTAAGCCCCTCAGCAGCAGAACAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACTGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGTTAAAGGATGAGCTTCGCAGTATGGAAAGATCAAAGAAAAGGGAAGGTGTTGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATACAGAAGTGTCAACAGGCATATCACAACTCCACAGATGTTCCACCACCAAATCCTGCAAGCGATACTTCAGGATCTGGCCTATCGCTTTTCTCAAGATTCACATTTTCTTAA 2382 0.406 MMDTHAEDSARSEENFPDVTHHNEDGSNGNLILENGLSDGNQGPADTHDQLLQMVMDLRFQNDFLKSQFEGFKNVDSVHSDSNIQKGVGGLEDGESDIVKELKDKIQLLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEAQTKLDQEVKEREEKYLELDSKFNRLHKRAKQRIQEVQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDVDRQQLRSANNNLRDTIEDLRRSLQPKESAIEALQQSVVEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIQSLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSHLKEEHEKERESWETASQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSTQTRILNMRDAELLAAKEEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLREVENEVLSITEERDRVLQDLQSAMANHEKEIAERDTALENVKQQIRSFEIKLDSANVKHLKEKEEWGLSLQNVEETWRIRCEAMKAENEATATKDMQKELEEFKQRCKKLKEEHASFHDLADRMIEEKDYEISRLIDENKNLRQSLQSRPPVDQNDNYTTAMHKLDSTNLSPSAAEQQILILARQQAQREEELALSQRHILALQEEIEELERENRLHSQQEAMLKDELRSMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHNSTDVPPPNPASDTSGSGLSLFSRFTFS 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01638 793 Coils Coil 354 413 - -
Gma01g01638 793 SMART 1grip 719 763 IPR000237 -
Gma01g01638 793 Pfam GRIP domain 720 759 IPR000237 -
Gma01g01638 793 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 52 778 - -
Gma01g01638 793 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 52 778 - -
Gma01g01638 793 Coils Coil 674 708 - -
Gma01g01638 793 Coils Coil 567 601 - -
Gma01g01638 793 Coils Coil 459 539 - -
Gma01g01638 793 Coils Coil 425 452 - -
Gma01g01638 793 Coils Coil 99 119 - -
Gma01g01638 793 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Gma01g01638 793 Coils Coil 606 626 - -
Gma01g01638 793 Coils Coil 177 257 - -
Gma01g01638 793 MobiDBLite consensus disorder prediction 1 46 - -
Gma01g01638 793 MobiDBLite consensus disorder prediction 1 21 - -
Gma01g01638 793 Coils Coil 265 349 - -
Gma01g01638 793 MobiDBLite consensus disorder prediction 22 46 - -
Gma01g01638 793 Coils Coil 127 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01638 Gma-Chr1 52106240 52116822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01638 - - gmx:100795939 1471.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01638 01 52106240 52116822 Gma01g01638 01 52106240 52116822 ECH
Gma01g01638 01 52106240 52116822 Gma11g00768 11 6426933 6436354 GST