Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00719 ATGATGTTGGACGGAACCGAAGACGAAGAGAAGTTTCTCGCCGCCGGAATCGCCGGCCTTCAGCAGAATTCCTTCTACATGCACCGTGCATTGGACTCGAACAATCTCAGGGATGCTTTGAAGTATTCGGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTATACATGCGCGCCTTTGATCAGTTAAGGAAGCTGGAGATGTTCTTTGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTCGTCCAGCACGCCGGCAACATTTTGCCCCGATTGTACCTCCTCTGTACAGTAGGATCAGTATACATCAAATCCAAGGAAGCTCCTGCAAAGGATGTTCTTAAGGATCTTGTGGAGATGTGCCGTGGCATTCAGCACCCTGTTCGCGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGCAGGGACAAATTGCCAGATATTGGTTCAGAGTACGAAGGGGATGCAGATACTGTAGCAGATGCTGTAGAGTTCGTGCTCCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGAATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAGTTGCGCGATCTTGTTGGCAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTAGATATGTACAAAGATGTTGTGCTTCCCAGAGTACTGGAGCAGGTTGTGAATTGCAAAGATGAGTTAGCTCAGTTCTACTTGATGGATTGTATAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCTTGATGTTTTGTTGGGTGCTTACCCCCAACTTCAGCCATCTGTGGACATCAAGACAGTACTGTCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGACGTGTTGCCAGAGTTTTTACAAGTGGAAGCATTTTCCAAATTAAGCAATGCCATTGGCAAGGTGATAGAGGCACAGCCTGACATGCCCACTGTTGGAGTTGTAACTTTATATTCGTCCCTTCTCACCTTCACTCTTCATGTCCACCCTGATCGACTTGATTATGCAGATCAAGTTTTGGGAGCATGTGTGAAAAAACTCTCTGGCAAGGGGAAAATTGAGGACAACAGGGCAACTAAGCAGATTGTTGCTCTATTAAGTGCTCCGCTAGAGAAATATAATGATATTATGATTGCATTGAAGCTTTCAAATTATCCTCGCGTAATAGAATACGTTGATATTCGAACTACTAAGGTCATGGCAACTGTCATTATTCAAAGCATTATGAAAAACGGAACACGCATTTCTACTTCAGAAAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGATGGGATCCCTAATGATGAGCTGGATGAAGATGATTTCAAAGAGGAGCAGAACTCTGTTTCCCGTCTAATCCAGATGCTTTATAATGATGATCCAGAAGAAATGTTTAAGATCATTGATACTGTGAGGAAGCACATACTGACTGGAGGACCAAAACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTCTTTAAAGTTGGTCAGACAGTTGCAAGGTCAAGAAGAAAATCCATTTGGAGATGATGCATCAACAACACCAAAGAAAATTTTTCAGCTTTTAAATCAGACCATCGAGACTTTGTCAGGTGTCCTGGCGCCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGACTGTGAATTGGAGCCTGTTGCTTATGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGATCACAGCTATCCATTTAATAATAGGGACTCTTCAAAGGATGCACGTCTTTGGTGTTGAAAACAGGGATACTTTAACCCACAAGGCCACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGGTCCTATTATGTCTTAAGCGGGCTTTAAGAATTGCAAATGCAGCCCAACAAATGGCAAATGCAGCACGAGGTAGCACCGGATCAGTAATGCTCTTCATTGAGATATTGAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCTACAAGTCACCGTTGCGGCTATCCAGGGCTTAATTGAGTTAATTATGAATGAAATGCAGAGCGACACCACAACTCCAGATCCAGCTGCCAATGCTTTCTTAGCCAGTACTATGCGGTATATAGAGTTCCAAAAACAAAAAGGCGGTGCGGTAGGTGAGAAGTATGAAGCCATCAAGGTTTCACATGCTGGATAA 2385 0.4323 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSADVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDNRATKQIVALLSAPLEKYNDIMIALKLSNYPRVIEYVDIRTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGIPNDELDEDDFKEEQNSVSRLIQMLYNDDPEEMFKIIDTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGQEENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTPDPAANAFLASTMRYIEFQKQKGGAVGEKYEAIKVSHAG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00719 794 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
Gma11g00719 794 SUPERFAMILY ARM repeat 459 748 IPR016024 -
Gma11g00719 794 Gene3D - 466 775 IPR042491 -
Gma11g00719 794 PIRSF Retromer_Vps35 2 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
Gma11g00719 794 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 790 - -
Gma11g00719 794 PANTHER VACUOLAR SORTING PROTEIN 35 2 790 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00719 Gma-Chr11 6042327 6050820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00719 K18468 - gmx:100809289 1542.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00719 11 6042327 6050820 Gma11g00719 11 6042327 6050820 ECH
Gma11g00719 11 6042327 6050820 Gma01g01678 01 52452461 52462203 ECH