Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00656 ATGAGAACTTCTTTGGGGAGTTTTTCTTCACCCTTCACAAGCTTCCGTTCCGCCTCATCATGGTTCGAGGTGTACGCCGCTTTCTCCACATTCATGATGCTTCTGAGAACCGCGATCAACGATCTCATACCCCACCAAGTTCGCACCTTCATAGTCACAAAGATAAAGGCTTTGTTCTCAGATCGCCAAAATATTAACCAGGTCTCACTCCAGATCAACGAGATTTGGGATGGCCAAATCAACCAGCTCTTCCAAGCCGCCCAAGAGTATCTCCCTGCTCAAATATCCCACTCTTACAAGTCCCTCAAAGTTGGAAAGCTCCCAAAGCACAAGAACATTGCGGTGGCAGTGGATGGAACACAAGAGGTCGTGGATCTTTTCCAAGGCATCAAGCTCAGCTGGAAGCTCGTTGAGAAAAGCCCCAAAAGCGATTCTGATCACCGCGATCATCATCCTAAGTCTAGCGGTGTTGGTTACGAGAGGAAGTCATTTACTCTAAGCTTTGATGAGAAGCATAGAGATGTAGTAATGAACAAGTACATTAACCACGTTCTAAGCACTTACCAGGACATGCAGACAGAGCAGAAAACCATCAAGATCCATTCCATTGGTGGAAGGTGTTGGCAGAAGAGTGACTTAACTcatccagcttcctttgactcgcttgcattggaacctgagcagaaacaagccattattgatgatttgaatcggtttttgcgacggaaggagctttacaagaaggtggggaagccttggaaacgtggctacctcctttatgggcctcccgggacaggaaaatctagccttattgctgctatagccaactacttgaagtttgatgtgtatgatttggagctaaGCTCTATGTTTTCTAACTCGGAACTCATGCGAGTCATGAGGGAAACAACCAACCGCTCCATCATCGTCATCGAAGACATAGACTGCAACAAAGAGGTGCATGCTCGACCAACAACGAAACCTTTTTCAGATTCAGATTCAGACTTCGACCGCAAGCGTGTTAAGGTTAAGACAagagatcatccactctttgaagaaattgatgagctattggagaaATTACAAGTCACCCCTGCAGTAGTAGCAGAGCAACTGATGAGAAATGAGGATCCTGATGATGCTTTGGAAGCCCTTGTTACATTTCTCAAAGAAATGGACAAGGATAGTAATTGTGACTTAGAGCTAAGAGGGACTAGAAGATCGGATGTCTGTTTACAACTTATTCAGTCATTTACTTTATTAAGTCACGCAGATTCAATGGGAAATATTGCTGTGTTTCTACTTTCGCCAGAGGAAGCAATCAACTCAAACGACACCATGTCTGGAACTATGTCTCCAAAAGGTTCTTTCAAGAAGAAAGCAATCAATGCCTCAAACATGCTGAGGAATTCTTTGACCAGGAAGGGTAGGCGAAGCAGTAAGGTCATGTCCGTTGAAATCGAGGATGTCCACGATGCTGAGGAGTTGAAAATTGTTGACGAGTTCCGTCAAGCTCTTATTTTGGACGAACTTCTTCCTGCAAAACACGATGATTATCATATGATGCTTAGATTCCTGAAGGCTAGGAAATTTGATATCGAGAAAACAAAGCAAATGTGGTCTGAAATGCTCAAATGGAGGAAGGAATTTGGTGCTGACACCATCACGGAGGACTTCGAATTCAAAGAACTTGATGAAGTCTTGCAATATTATCCCCAAGGCCATCATGGAGTGGACAAAGATGGAAGACCTGTGTACATAGAGAGATTAGGCCAAGTCGATGCCACGAAGATGATGCAAGTCACAACCATGGATCGCTACATCAAATACCACGTAAAGGAGTTTGAGAGGACATTTGATGTTAAGTTTGCAGCTTGTTCAATTGCTGCAAAGAAGCACATAGATCAAAGTACAACTATCCTGGACGTGCAGGGAGTGGGGCTTAAAAGCTTCAGCAAACATGCTAGGGAACTTGTTACTCGCCTTCAGAAGATTGACGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTTAGGATACTGTGGAACACCGTAAAATCATTCCTTGATCCTAAGACCACGGCAAAAATCAATGTTCTTGGCAACAAGTATGACACCAAATTGCTAGAAATAATTGATGCAAGtgagttgcctgaatttttaggaggcacttgtacatgtgctgatcaaggaggctgtatgcgctctgataagggcccatggaaggatgcagaAGTAATGAGGATGGTTCAGAATGGTGATCACAAATGTTCAAAAAAAAGTGCCTCACAAGGCGAGGAAGAGAAAGAAAATTCTGAGATCCATCGAGCTCCCTCATCATCATCTTATCCTAGTTTTTGTTTCCTTACTTTGAACTTTCTGAAAAACATAAGTTCACAGGTCCCTGCTACTAAAACTTCCCAGCCCTTATCACCGATGGCTGATAAATCTGCTGTGAAAAAAGTTGATGAGAAAGCTTCCAAGCCTAAGGACTTAGCCCCTACAGCTGATAAAACTGCAGCATCAACTGAGTTTTCGACTGTGATGAAACGCATGGCTGAGTTGGAGGAGAAAATCGTCACCATCAATAATAAGCCCACTGCTATGCCACCTGAGAAGGAGCAAATGCTGAATGCAACTATAACTCGAGCCGATGACTTGGAGAAACAACTTTTGGCTACCAAGAAGGCTCTGGAGGATTCACTTGTTAAGCAAGAAGAGCTTTCGGCTTATCTTGACAAAAAGAAGAAGAAGAAGAAGAAGAGATTTTTCTTCTTTTAA 2805 0.3768 MRTSLGSFSSPFTSFRSASSWFEVYAAFSTFMMLLRTAINDLIPHQVRTFIVTKIKALFSDRQNINQVSLQINEIWDGQINQLFQAAQEYLPAQISHSYKSLKVGKLPKHKNIAVAVDGTQEVVDLFQGIKLSWKLVEKSPKSDSDHRDHHPKSSGVGYERKSFTLSFDEKHRDVVMNKYINHVLSTYQDMQTEQKTIKIHSIGGRCWQKSDLTHPASFDSLALEPEQKQAIIDDLNRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAIANYLKFDVYDLELSSMFSNSELMRVMRETTNRSIIVIEDIDCNKEVHARPTTKPFSDSDSDFDRKRVKVKTRDHPLFEEIDELLEKLQVTPAVVAEQLMRNEDPDDALEALVTFLKEMDKDSNCDLELRGTRRSDVCLQLIQSFTLLSHADSMGNIAVFLLSPEEAINSNDTMSGTMSPKGSFKKKAINASNMLRNSLTRKGRRSSKVMSVEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSEMLKWRKEFGADTITEDFEFKELDEVLQYYPQGHHGVDKDGRPVYIERLGQVDATKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFSKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKYDTKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDAEVMRMVQNGDHKCSKKSASQGEEEKENSEIHRAPSSSSYPSFCFLTLNFLKNISSQVPATKTSQPLSPMADKSAVKKVDEKASKPKDLAPTADKTAASTEFSTVMKRMAELEEKIVTINNKPTAMPPEKEQMLNATITRADDLEKQLLATKKALEDSLVKQEELSAYLDKKKKKKKKRFFFF 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00656 934 Pfam CRAL/TRIO domain 569 731 IPR001251 -
Gma11g00656 934 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 801 929 - -
Gma11g00656 934 SMART CRAL_TRIO_N_2 518 543 IPR011074 -
Gma11g00656 934 SUPERFAMILY CRAL/TRIO domain 563 759 IPR036865 -
Gma11g00656 934 SUPERFAMILY CRAL/TRIO N-terminal domain 491 559 IPR036273 -
Gma11g00656 934 SMART sec14_4 563 734 IPR001251 -
Gma11g00656 934 MobiDBLite consensus disorder prediction 760 789 - -
Gma11g00656 934 MobiDBLite consensus disorder prediction 825 840 - -
Gma11g00656 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 374 IPR027417 -
Gma11g00656 934 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 451 788 - -
Gma11g00656 934 CDD AAA 242 315 - -
Gma11g00656 934 Gene3D - 213 345 IPR027417 -
Gma11g00656 934 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 801 929 - -
Gma11g00656 934 Pfam ATPase family associated with various cellular activities (AAA) 258 316 IPR003959 GO:0005524|GO:0016887
Gma11g00656 934 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 563 737 IPR001251 -
Gma11g00656 934 CDD SEC14 564 732 IPR001251 -
Gma11g00656 934 Gene3D - 346 392 - -
Gma11g00656 934 Gene3D - 458 550 - -
Gma11g00656 934 MobiDBLite consensus disorder prediction 760 783 - -
Gma11g00656 934 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Gma11g00656 934 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 451 788 - -
Gma11g00656 934 MobiDBLite consensus disorder prediction 810 846 - -
Gma11g00656 934 Gene3D - 551 762 IPR036865 -
Gma11g00656 934 Pfam CRAL/TRIO, N-terminal domain 515 541 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00656 Gma-Chr11 5437131 5451832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00656 499 728 Acyl Lipid Metabolism Gene Families AT5G47730 28.279 1.25e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00656 - - gmx:100796901 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00656 11 5437131 5451832 Gma11g00656 11 5437131 5451832 ECH
Gma01g01747 01 53144941 53149316 Gma11g00656 11 5437131 5451832 GST