Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01747 ATGTCTGGAACTATGTCTCCTAAAGGTTCTTTCAAGAAGAAAGCAATCAATGCCTCTAACATGCTGAGGAATTCTTTGACCAGAAAGGGTAGGCGAAGCAGTAAGGTCATGTCCGTTGAAATTGAGGATGTCCACGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGACGAACTTCTTCCTGCAAAACACGATGATTATCATATGATGCTTAGATTCCTGAAGGCCAGGAAATTTGATATTGAGAAAACAAAGCAAATGTGGTCTGAAATGCTCAAATGGAGGAAGGAGTTTGGTGCCGACACCATCACGGAGGATTTTGAATTCAAAGAAATTGATGAAGTATTGCAATATTATCCCCAAGGACATCATGGAGTGGACAAAGATGGAAGACCTGTGTACATAGAGAGATTAGGCCAAGTCGATGCCACGAAGATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCACGTAAGGGAATTTGAGAGGACATTTGATGTAAAGTTTGCAGCCTGTTCAATTGCTGCAAAGAAGCACATCGATCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTTAAAAACTTCAACAAACATGCTAGGGAACTCGTTACTCGCCTTCAGAAGATTGACGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTTAGGATACTGTGGAACACCGTAAAATCATTCCTTGATCCTAAGACCACCGCAAAAATCAACGTTCTTGGCAACAAGTATGACACCAAATTGCTAGAAATCATTGATGCAAGTGAGTTGCCTGAATTTTTAGGAGGTACTTGTACATGTGCTGATCAAGGAGGCTGCATGCGCTCTGATAAGGGCCCTTGGAAGGATGCAGAAATTATGAGGATGGTTCAGAATGGTGACCACAAATGTTCAAAAAAAAGTGTGTCACAAGGCAAGGAAGAGAAAGAAAATTCTGAGGAACACAAGACTTCCAAATTGGAGGCAAATCACACCCCTCACCTTTCTCCAGTTGTTGAAGAGGTCCCTGCTACTAAAGCTTCCCAGCCTAAGGACTTATCCCCGATGGCTGATAAATCTGCTGTGAAAAAAGTTGATGAGAAAGCTTCCAAGCCTCAGAACACGCCTGATAAAACTGCAGCATCAACAGAGTTTTCGACTGTGATGAAACGCATGGCTGAGTTGGAGGAGAAAATGGTCACCATCAACAATCAGCCTACTGCCATGCCACCTGAGAAGGAGCAAATGCTGAATGCAACTATAACTCGAGCCGATGACTTGGAGAAACAACTTTTGGCTACCAAGAAGGCTCTGGAGGCTTCACTTGTTAAGCAAGAAGAGCTTTCGGCTTATCTTGACAAAAAGAAGAAGAAGAAGAAGAAGAGATTTTTCTTCTTTTAA 1446 0.426 MSGTMSPKGSFKKKAINASNMLRNSLTRKGRRSSKVMSVEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSEMLKWRKEFGADTITEDFEFKEIDEVLQYYPQGHHGVDKDGRPVYIERLGQVDATKMMQVTTMDRYIKYHVREFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKNFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKYDTKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDAEIMRMVQNGDHKCSKKSVSQGKEEKENSEEHKTSKLEANHTPHLSPVVEEVPATKASQPKDLSPMADKSAVKKVDEKASKPQNTPDKTAASTEFSTVMKRMAELEEKMVTINNQPTAMPPEKEQMLNATITRADDLEKQLLATKKALEASLVKQEELSAYLDKKKKKKKKRFFFF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01747 481 Gene3D - 105 317 IPR036865 -
Gma01g01747 481 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 386 476 - -
Gma01g01747 481 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 9 383 - -
Gma01g01747 481 CDD SEC14 118 286 IPR001251 -
Gma01g01747 481 PRINTS Cellular retinaldehyde-binding protein signature 75 97 - -
Gma01g01747 481 PRINTS Cellular retinaldehyde-binding protein signature 244 263 - -
Gma01g01747 481 PRINTS Cellular retinaldehyde-binding protein signature 277 286 - -
Gma01g01747 481 SMART sec14_4 117 288 IPR001251 -
Gma01g01747 481 MobiDBLite consensus disorder prediction 314 344 - -
Gma01g01747 481 Pfam CRAL/TRIO, N-terminal domain 69 95 IPR011074 -
Gma01g01747 481 SUPERFAMILY CRAL/TRIO N-terminal domain 45 113 IPR036273 -
Gma01g01747 481 MobiDBLite consensus disorder prediction 372 388 - -
Gma01g01747 481 SUPERFAMILY CRAL/TRIO domain 117 313 IPR036865 -
Gma01g01747 481 MobiDBLite consensus disorder prediction 314 396 - -
Gma01g01747 481 Pfam CRAL/TRIO domain 123 285 IPR001251 -
Gma01g01747 481 Gene3D - 13 104 - -
Gma01g01747 481 SMART CRAL_TRIO_N_2 72 97 IPR011074 -
Gma01g01747 481 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 117 291 IPR001251 -
Gma01g01747 481 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 9 383 - -
Gma01g01747 481 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 386 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01747 Gma-Chr1 53144941 53149316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01747 53 282 Acyl Lipid Metabolism Gene Families AT5G47730 27.869 2.48e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01747 - - gmx:100527533 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01747 01 53144941 53149316 Gma11g00656 11 5437131 5451832 GST