Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00634 ATGGCTGCTTCAAAGTTAACCTCATGCGTGGCGGTAACTTCCGCCGCGGTGGTTTCCATGTCCGCCTTCTCCGATCGTGCCTACGCCGATTCTTACTTCCGACTCCCTTTCTTCTCCTCTAAACCTTCCAATGAACCCTCGCCGCCGAACCAGACCTCCGACTCCAAGTCCGAGCCTCCGCCGCCCGATGAACCTAACAAATCGGGTGGCTTCGACCCGGAATCCTTAGAAAGAGGAGCCAAAGCACTCCGTGAAATCAATAGTTCTCCCTACTCCAAGCAGCTGTTCGATTTAATGCGAAAACAGGAGGAAACTCGCCTCGCTGAATTAGATGCTGAGAAAGTTCATTACGAACTTATTCAATCTCAAGGAGATATTGAAAGGCAGCGTAAAATGGCTGAAGAACAGCGCAATCTAATACAAGACCAAGCCCAGAGACAGGCCCAGGTGTTGCGATATGAAGATGAGTTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCCCAAAGGCAACATAATGTTGAATTGGTCAAGATGCAAGAGCAGTCTTCTTTCAGAAAGGAGCAGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGAGAGCTGAAATTGAAAGAGAAACTATTAGAGTTAAGGCAATGGCGGAGGCTGAAGGCCGAGCCCATGAAGCAAAATTGACCGAGGATCATAACAGGAGAATGCTTATAGAACGAATGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAACCTTTAGTCATATTGAAGGTGGTCTAAGGGCCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAATATATACGACTAGAGAAGGTAGTAAAGTCACCTGGGGCTATATTAATCGGATTTTGGGGCAGCCATCGCTGATCCGGGAGTCATCTATGGCAAAGTTTCCTGGGTCAGAGATCATTTCTCAAGCCAAAAACAAAGTGCTGTGTAATAGTACTTTGGCTGGGGCAGAAAAGCCTATTGGGAGTAAAAATGGTCTTGGAAATGTAATCCTTCATCCATCATTGCAGAGAAGAATAGAGCATCTTGCACGTGCAACATCAAATACCAAATCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCTGGCACTGGTAAAACGATGGTTGCAAAGGAATTAGCTAGAAGATCGGGTTTGCATTATGCCATGATGACTGGAGGAGATGTTGCACCTCTTGGCGCACAGGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCAAGAAAAGGCCTATTGCTTTTTATTGATGAGGCGGATGCTTTCCTTTGCGAgcgtaacaGCTCCCACATGAGTGAAGCTCAACGAAGTGCTCTAAATGCATTGCTCTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTCCTGGCGACAAACAGGCCTGGTGATCTTGATAGTGCAGTTACTGATCGCATTGATGAAGTAATTGAATTCCCACTTCCAGGAGAGGAAGAGCGTCTAAAGTTGTTGAAGCTCTATTTGAACAAATATTTATGTGATGACAATAATGGCTCCAAGGGGGGTTTCTTCCTGAAGAAGCAACCTCAGAAGATTACCATAAAAGATTTATCTGAAGATGTTTTCAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGCGAGATCGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTTTATGGGCGCCCAGACTGCATCTTGGATGCCCAGTTGTTTAGAGAAATTGTAGATTACAAGGTCGTGGAACATCATCAACGATTAAAACTAGCAGCTGAAGGTGGCCAGCCTTGCCAAATATAA 1896 0.4531 MAASKLTSCVAVTSAAVVSMSAFSDRAYADSYFRLPFFSSKPSNEPSPPNQTSDSKSEPPPPDEPNKSGGFDPESLERGAKALREINSSPYSKQLFDLMRKQEETRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQDQAQRQAQVLRYEDELARKRMQTDHEAQRQHNVELVKMQEQSSFRKEQARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERMQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGIYTTREGSKVTWGYINRILGQPSLIRESSMAKFPGSEIISQAKNKVLCNSTLAGAEKPIGSKNGLGNVILHPSLQRRIEHLARATSNTKSHQAPFRNMLFYGPPGTGKTMVAKELARRSGLHYAMMTGGDVAPLGAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFFLKKQPQKITIKDLSEDVFREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDAQLFREIVDYKVVEHHQRLKLAAEGGQPCQI 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00634 631 Gene3D - 347 535 IPR027417 -
Gma11g00634 631 Pfam ATPase family AAA domain-containing protein 3, N-terminal 52 318 IPR021911 -
Gma11g00634 631 Coils Coil 126 146 - -
Gma11g00634 631 MobiDBLite consensus disorder prediction 180 211 - -
Gma11g00634 631 MobiDBLite consensus disorder prediction 53 67 - -
Gma11g00634 631 SMART AAA_5 386 519 IPR003593 -
Gma11g00634 631 CDD AAA 384 517 - -
Gma11g00634 631 Coils Coil 191 218 - -
Gma11g00634 631 PANTHER PUTATIVE ATP-ASE 1 628 IPR039188 GO:0005739|GO:0007005
Gma11g00634 631 MobiDBLite consensus disorder prediction 38 77 - -
Gma11g00634 631 MobiDBLite consensus disorder prediction 38 52 - -
Gma11g00634 631 ProSitePatterns AAA-protein family signature. 489 508 IPR003960 GO:0005524|GO:0016887
Gma11g00634 631 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 628 - -
Gma11g00634 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 613 IPR027417 -
Gma11g00634 631 Pfam ATPase family associated with various cellular activities (AAA) 390 517 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00634 Gma-Chr11 5265675 5271714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00634 366 593 Miscellaneous Gene Families AT5G53170 29.289 2.29e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00634 K17681 - gmx:100777755 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00634 11 5265675 5271714 Gma11g00634 11 5265675 5271714 ECH
Gma01g01776 01 53392495 53397885 Gma11g00634 11 5265675 5271714 GST