Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01776 ATGGCTGCTTCAAGGTTAACCTCATGCGTGGCGGTAACTTCCGCTGCGGTGGTTTCCATGTCCACCTTCTCCGATCGTGCCTACGCCGATTCTTACTTTCGACTCCCGTTCTTCTCTTCTAAATCTTCCAGTGAGCCCTCGCCGCCGAATCAGCCCTCTGACTCCAATTCCGAGCCTCCGCCGCCCGATGAACCTAACAAATCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGCGAAATCAATAGTTCTCCCTACTCCAAGCAGCTGTTTGATTTAATGCGAAAACAGGAGGAAACTCGCCTCGCTGAATTAGATGCTGAGAAAGTGCATTACGAACTTATTCAATCTCAAGGAGATATTGAAAGGCAGCGTAAAATGGCTGAAGAACAACGCAATCTTATACAGGACCAAGCCCAGAGACAGGCCCAGGTGTTGCGATATGAAGATGAATTGGCAAGGAAAAGATTGCAGACAGATCATGAAGCCCAAAGGCAACATAATGTTGAATTGGTCAAGATGCAAGAGCAGTCTTCTTTCAGAAAGGAGCAGGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGGGAGAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCAGAGGCTGAAGGCCGAGCCCATGAAGCAAAATTGACTGAGGATCATAACAGGAGAATGCTTATAGAACGAATGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATTGAAGGGGGCCTAAGGGCCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAATATATACGACTAGAGAAGGTAGTAAAGTCACTTGGGGCTATATTAATCGGATTTTGGGGCAGCCATCTCTGATCCGGGAATCATCTATGGCAAAGTTTCCTGGGTCAAAGATCATTTCTCAAGCCAAAAATAAAGTTCTACATGATAGTACTTTGGCTGGGGCAGAAAAGCCTATTGGGAGTAAAAATGGTCTTGGAAATGTAATCCTTCATCCATCGTTGCAGAGAAGAATAGAGCATCTTGCACGTGCAACATCAAATACCAAATCCCATCAGGCACCATTTCGTAACATGCTTTTTTACGGGTCTCCTGGCACTGGTAAAACGATGGTTGCAAGAGAAATAGCTAAAAGATCGGGTTTGGATTATGCCATGATGACTGGAGGAGATGTTGCACCTCTGGGCGCACAGGCTGTTACCAAAATTCATGATATATTTGATTGGTCCAAGAAATCAAGAAAAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCCCACATGAGTGAAGCTCAACGAAGTGCTCTAAATGCATTGCTCTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTCCTTGCGACAAACAGGCCAGGTGATCTTGATAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTCCCGCTACCAGGAGAGGAAGAGCGTCTAAAGTTGTTGAAGCTCTATTTGAACAAGTATTTATGTGATGACAATAATGGCTCCAAGGGGGGTTTCTTTCTGAAGAAGCAGCCTCAGAAGATTGCCATAAAAGATTTATCTGAAGATGTTTTCAGAGAGGCTGCCACGAAAACAGAGGGATTTTCTGGTCGTGAGATCGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGCCCAGACTGCATCTTGGATTCCCAGTTGTTTAGAGAAAGTATAGATTACAAGGTCGTGGAACATCATCAACGATTAAAACTAGCAGCTGAAGGTGGCCAGCCTGGCCAAATATAA 1893 0.4506 MAASRLTSCVAVTSAAVVSMSTFSDRAYADSYFRLPFFSSKSSSEPSPPNQPSDSNSEPPPPDEPNKSGFDPESLERGAKALREINSSPYSKQLFDLMRKQEETRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQDQAQRQAQVLRYEDELARKRLQTDHEAQRQHNVELVKMQEQSSFRKEQARQATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERMQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGIYTTREGSKVTWGYINRILGQPSLIRESSMAKFPGSKIISQAKNKVLHDSTLAGAEKPIGSKNGLGNVILHPSLQRRIEHLARATSNTKSHQAPFRNMLFYGSPGTGKTMVAREIAKRSGLDYAMMTGGDVAPLGAQAVTKIHDIFDWSKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFFLKKQPQKIAIKDLSEDVFREAATKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFRESIDYKVVEHHQRLKLAAEGGQPGQI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01776 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 611 IPR027417 -
Gma01g01776 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 54 317 IPR021911 -
Gma01g01776 630 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 626 - -
Gma01g01776 630 PANTHER PUTATIVE ATP-ASE 1 626 IPR039188 GO:0005739|GO:0007005
Gma01g01776 630 CDD AAA 383 516 - -
Gma01g01776 630 Coils Coil 190 217 - -
Gma01g01776 630 MobiDBLite consensus disorder prediction 39 72 - -
Gma01g01776 630 MobiDBLite consensus disorder prediction 179 210 - -
Gma01g01776 630 MobiDBLite consensus disorder prediction 52 67 - -
Gma01g01776 630 SMART AAA_5 385 518 IPR003593 -
Gma01g01776 630 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Gma01g01776 630 Gene3D - 338 534 IPR027417 -
Gma01g01776 630 Coils Coil 125 145 - -
Gma01g01776 630 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01776 Gma-Chr1 53392495 53397885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01776 365 592 Miscellaneous Gene Families AT5G53170 28.870 3.93e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01776 K17681 - gmx:100776095 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01776 01 53392495 53397885 Gma01g01776 01 53392495 53397885 ECH
Gma01g01776 01 53392495 53397885 Gma11g00634 11 5265675 5271714 GST