Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00548 ATGGAGAGGGAGAAGAAGAGACGTTTGGTATTGGTTCATGGAGCCTGCCATGGGGCGTGGTGTTGGTACAAGGTGGCTGCTTTGTTGAAATCCAATGGACACCAAGTCACAGCTCTAGACATGGCTGCATCAGGCATCCATCCAAAGCAGGTACACGACCTCAATTCAATTTCAGAATATTTTGAGCCATTAATGTACTTTCTAGGGTCTTTGCCAACAGAGGAGCGTGTAATCCTTGTGGGTCACAGCTTTGGTGGGGCATGCATATCTGTAGCTATGGAAATGTTCCCTACCAAGATTGCTGCTGCGGTATTTGTTGCCGCTTGGATGCCTTCTCCTGACCTAAGCTTTTCCACTCTCCTCCAAGAGTTCCAGTATAGTCGTATAATGGAATCTGATTTGCACTCAAAGATCATGTTTGATGAGAACACCAGCAATCATCGAAATGGATCAAGGATGTTCGGGCCTCAATTCTTAGCATCCAAATTATACCAACTATCTCCACCCGAGGACCTGACTCTAGCAATGTCACTGCTGAGACCCACTCGCATTTATGGTGATGTAGAACTGTTGCGTGAGAATACAAGACTCACAAAAGACAACTATGGAACCGTGGCCAAAGCCTATATAGTGTGCGAGCAAGACAACGTGTTAAGGAAAGATTTTCAACTGTCAATGATTGAACGAAACCCTCCAAACGAAGTGAAAGTGATTGTTGGTGCTGATCACATGCCCATGTTCTCCAAACCACAAGAGCTTTTCTCTTACCTTCAAGAGATTGCGAACACCTATTACTAG 798 0.4511 MEREKKRRLVLVHGACHGAWCWYKVAALLKSNGHQVTALDMAASGIHPKQVHDLNSISEYFEPLMYFLGSLPTEERVILVGHSFGGACISVAMEMFPTKIAAAVFVAAWMPSPDLSFSTLLQEFQYSRIMESDLHSKIMFDENTSNHRNGSRMFGPQFLASKLYQLSPPEDLTLAMSLLRPTRIYGDVELLRENTRLTKDNYGTVAKAYIVCEQDNVLRKDFQLSMIERNPPNEVKVIVGADHMPMFSKPQELFSYLQEIANTYY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00548 265 PANTHER - 5 264 - -
Gma11g00548 265 Pfam Alpha/beta hydrolase family 9 253 IPR000073 -
Gma11g00548 265 PANTHER METHYLESTERASE FAMILY MEMBER 5 264 IPR045889 -
Gma11g00548 265 SUPERFAMILY alpha/beta-Hydrolases 3 261 IPR029058 -
Gma11g00548 265 Gene3D alpha/beta hydrolase 1 265 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00548 Gma-Chr11 4575587 4577722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00548 4 172 Miscellaneous Gene Families AT5G10300 42.012 7.17e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00548 - - gmx:100818925 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01858 01 54122298 54130204 Gma11g00548 11 4575587 4577722 GST
Gma11g00548 11 4575587 4577722 Gma16g01329 16 32182931 32185897 PCT
Gma11g00548 11 4575587 4577722 Gma02g00570 02 5743495 5747996 PCT
Gma02g00569 02 5708953 5711445 Gma11g00548 11 4575587 4577722 PCT