Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01858 ATGGAATTTCTGCTGTCTTTGGCAGAAGAAGAGCAAGTAATCCTTGTGGGTCATAGCTTTGGTGGTCTATGCATATCTGTAGCCATGGAATTGTTCCCTACCAAGATTGCAGCTGCAGTATTTGTTTCCGCTTGGCTGCCTTCTCCCGACCTAAACTATTTGGATCTCCTCCAAGAGTACAAAAGCAGGTCAGAATTTAATTCGATTATGCTTGATGAGAATACCAACAATCATCAAAATGGGTCTCGGGCATTTGACCCTCAATTCTTAGCTTCCAACACATACCAACTATCTCCATCAGGGACTTGA 309 0.4304 MEFLLSLAEEEQVILVGHSFGGLCISVAMELFPTKIAAAVFVSAWLPSPDLNYLDLLQEYKSRSEFNSIMLDENTNNHQNGSRAFDPQFLASNTYQLSPSGT 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01858 102 Pfam alpha/beta hydrolase fold 9 78 IPR000073 -
Gma01g01858 102 SUPERFAMILY alpha/beta-Hydrolases 7 96 IPR029058 -
Gma01g01858 102 Gene3D alpha/beta hydrolase 1 102 IPR029058 -
Gma01g01858 102 PANTHER METHYLESTERASE FAMILY MEMBER 1 100 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01858 Gma-Chr1 54122298 54130204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01858 1 99 Miscellaneous Gene Families AT5G10300 36.190 5.85e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01858 - - gmx:100818925 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01858 01 54122298 54130204 Gma11g00548 11 4575587 4577722 GST
Gma01g01858 01 54122298 54130204 Gma16g01329 16 32182931 32185897 PCT
Gma01g01858 01 54122298 54130204 Gma02g00570 02 5743495 5747996 PCT
Gma02g00569 02 5708953 5711445 Gma01g01858 01 54122298 54130204 PCT