Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00294 ATGGCGGAGCCAGGAGACAGGGACGTGATTATAGGAAGAGGTGACGGAGAAGAGGAGTCATGTTCTGGCTTTCTGGGATTGAGGTTTGATATTGGTGGTAGTAGTAAAAGTAGAACCAAAAGTTTTCATCCCCCAATTGAAACGCATTGGGATCTGAATTCAGCAGCAGCAGCCGCAGCAGGGAAAAAAGCTTCGTCCCCTATCAAATCACTCTTGTCTTACCCGCTCATGAAATTTAGGAAGACTAAAAGCCTTATAATGATTCTAGAAGGAGCTCATGATCCTAAGGATAAACAAATTGTTGACTCTTTTCGCGAAATGCTTTTACGAGAAGGTCTCTTGCCACCTAAACACAATGATTATCATACCCTTCTAAGGTTTCTGCGCATGAGGGATTTCGACATGTCAAAATCCAAAGAGATGTTTCAAAATTATCTCAAATGGCGCAAGGATTTTCGAGTAGACGTGCTTCCAAAGGAATTCAATTTCACGGAGTATGATGAAGTGAAGAAATGCTATCCTCATGGATACCACGGAGTTGATAGATACGGCAGACCCGTGTATATTGAGAGAATTGGGATGGTAGACCTTAACAATCTGGGGCAAGTAACCACATTTGAAAGGTTTATCAAACATCATGTGTCAGAGCAAGAAAAAACTCTCAAAGTAAGATTCCCTGCATGTTCACTAGCTGCTAAAAGGCACATAGCATCCACTACAAGTATCTTGGATGTCAACGGAGTAGGAATGTCTAATTTCTCAAAGCCCGCAAGGTACCTCTTTATGGAAATTCAGAAAATCGATAGTTGTTACTATCCTGAGACTCTAAATCAGCTCTTTATTATTAATGCCGGATCTGGGTTTAGGATGCTGTGGAAAGCAGTAAAGGCATTCCTAGATGTACGCACAATGGCAAAAATTCATGTGTTAGGTTCTAATTATCTCAGCGTCCTACTTGAGGCTATTGATCCAAGTAATTTGCCAACTTTTCTGGGTGGTAATTGCACATGTTCTGATTATGGAGGTTGTCTGATGAGTGATCGAGGGCCCTGGAAAAACCCAGAAGTGTTAGAAATGATTCAGGTTGTTAATTTGAGAGAAGAGATTAATGGTAAATGCGAAGATGGTGATGTGGACATAGAAGATTCCTCGATGCCCAAAATGGTTGACATGCAAAACAAAGATGGCAATATTATGAATCTACTTGAGGAAGCAGCATGTCCGGGATCAGACTCGGCATGTTCTTGTAGATTAGTATTGCAAAAAATTGATTGCCTTGAAGCTAGTCTTGGAGACATCAAGAATAAAATCAAGACACTGGAAGATGCACTTCAGGACACCAAAATGGCCTTGAAACAACATGAGGAACGACCAAAAACACCCAAACAAATTCTCTACGCAGATCGAATCAAAGCTCCTCCATCCAATTCCGAGATGAGCACTGGCGACCTTCTCAGCATCGAACCTCTCGAACTTAAGTTCTTCTTTGAGCTCAAGAAGCAGATATCATGCTCTCTTATATTGTCAAATAAGACCGATAGCTATATAGCTTTCAAGGTGAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAACACCGGAGTAGTCATGCCACAATCTACATGTGATGTTATTGTTACCATGCAAGCGCAAAAGGATGCTCCGGCTGATATGCAATGCAAGGACAAGTTTCTTCTTCAAAGCGTAAAAGTAGATGATGGAACCACCGCAAAGGATATCACAGCAGAAATGTTCAACAAGGAAGCAGGGCACGTGGTTGAGGAATGTAAATTGAGAGTGGTGTATGTCTCTCCTACTCAACCTCCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCACCTCGAGGTTCTGTTTCTGACAATGGAAATGTTAGTGGTGTTGATTCTGCAGCGGTGACAAGAGCATTTGTTGAACGGCATGAAGGTCCAGAAAAATCTGCAGAGGGAAAAGCTCTTATCTCAAGGCTAGTTGAAGAAAAGAATAATGCAATTCAACAAAATAACAAGCTTTGTCAGGAATTGGACCTACTGAGACGGGAAAGCAACAAAAGTCGTGGGGGGGTGTCGATGGCCATTGTCATACTAATTGTTTTACTTGGCATAATTATGGGGTATCTCATGAAGAAAACCTAA 2160 0.4176 MAEPGDRDVIIGRGDGEEESCSGFLGLRFDIGGSSKSRTKSFHPPIETHWDLNSAAAAAAGKKASSPIKSLLSYPLMKFRKTKSLIMILEGAHDPKDKQIVDSFREMLLREGLLPPKHNDYHTLLRFLRMRDFDMSKSKEMFQNYLKWRKDFRVDVLPKEFNFTEYDEVKKCYPHGYHGVDRYGRPVYIERIGMVDLNNLGQVTTFERFIKHHVSEQEKTLKVRFPACSLAAKRHIASTTSILDVNGVGMSNFSKPARYLFMEIQKIDSCYYPETLNQLFIINAGSGFRMLWKAVKAFLDVRTMAKIHVLGSNYLSVLLEAIDPSNLPTFLGGNCTCSDYGGCLMSDRGPWKNPEVLEMIQVVNLREEINGKCEDGDVDIEDSSMPKMVDMQNKDGNIMNLLEEAACPGSDSACSCRLVLQKIDCLEASLGDIKNKIKTLEDALQDTKMALKQHEERPKTPKQILYADRIKAPPSNSEMSTGDLLSIEPLELKFFFELKKQISCSLILSNKTDSYIAFKVKTTNPKKYCVRPNTGVVMPQSTCDVIVTMQAQKDAPADMQCKDKFLLQSVKVDDGTTAKDITAEMFNKEAGHVVEECKLRVVYVSPTQPPSPVPEGSEEGSSPRGSVSDNGNVSGVDSAAVTRAFVERHEGPEKSAEGKALISRLVEEKNNAIQQNNKLCQELDLLRRESNKSRGGVSMAIVILIVLLGIIMGYLMKKT 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00294 719 SMART CRAL_TRIO_N_2 120 145 IPR011074 -
Gma11g00294 719 SMART sec14_4 165 336 IPR001251 -
Gma11g00294 719 Gene3D Immunoglobulins 478 608 IPR013783 -
Gma11g00294 719 ProSiteProfiles Major sperm protein (MSP) domain profile. 484 604 IPR000535 -
Gma11g00294 719 SUPERFAMILY CRAL/TRIO N-terminal domain 91 158 IPR036273 -
Gma11g00294 719 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 34 460 - -
Gma11g00294 719 MobiDBLite consensus disorder prediction 605 634 - -
Gma11g00294 719 CDD SEC14 166 334 IPR001251 -
Gma11g00294 719 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 34 460 - -
Gma11g00294 719 Gene3D - 82 152 - -
Gma11g00294 719 Pfam CRAL/TRIO domain 173 333 IPR001251 -
Gma11g00294 719 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 165 339 IPR001251 -
Gma11g00294 719 Coils Coil 662 689 - -
Gma11g00294 719 Pfam MSP (Major sperm protein) domain 485 590 IPR000535 -
Gma11g00294 719 Coils Coil 423 457 - -
Gma11g00294 719 Gene3D - 154 365 IPR036865 -
Gma11g00294 719 SUPERFAMILY CRAL/TRIO domain 165 360 IPR036865 -
Gma11g00294 719 PRINTS Cellular retinaldehyde-binding protein signature 292 311 - -
Gma11g00294 719 PRINTS Cellular retinaldehyde-binding protein signature 123 145 - -
Gma11g00294 719 PRINTS Cellular retinaldehyde-binding protein signature 325 334 - -
Gma11g00294 719 SUPERFAMILY PapD-like 475 619 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00294 Gma-Chr11 2364546 2372133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00294 124 330 Acyl Lipid Metabolism Gene Families AT5G47730 31.100 3.77e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00294 - - gmx:100807344 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00294 11 2364546 2372133 Gma11g00294 11 2364546 2372133 ECH
Gma01g02114 01 56480640 56485175 Gma11g00294 11 2364546 2372133 GST