Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00254 ATGTTCTTTGATGATTTGGTCTTGGTGTTGTCTTTGAAACCCACGGGCTACCCCCACTCACTACCACCAGCGACGCCTCCGATACTCTTCTCTTTTATCAATTCGGATATGTCTTCTGATAGTGCAAAGGAAAATGCATCAGTAGTTGATTCATCAGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCAGGTTACAAGTTTAAAGAAAACATTAATCCAACTAGGGCAGATAAAGGGGGACATTCTCATGGTCAGATAGGGCATCCAGCAGGAATTGGAGTGGAAAAATGTCACAATACAAAATACTTTGTCATCAAGAGTTTGAACCATCAAAACATCCATTTGTCGATTGAGAAAGGAATTTGGGCTACTCAAATCATGAATGAACCGATTCTACAAGAAGCTTATCATAATTCAGGCAGTGTAATCCTTATATTCAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGACCTCCATTGGAAGGGGGAGAGACAATGCTTGGAGTGAGGGAACTGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGCTGTGTTTGAATGATTTGCCTTTCCACAAGACTCTACATCTCAAGAATCCATTGAATGATTATAAGCCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGACATTGGTCTAGCTCTTTGCAAACTTCTTGACGGTAAGAATGACACGGATGGCCTGCTGACCAGTTTATCAAGGGATGAATTTTCTTTGAAAGGGCATTATGTGAGTACTCCAAGTTCAATGGGAGATGAAGACTGTAACTTTCCTCCATTGCATATGCTGTGGCCAATGCCCCTGCCTTATTCTTTCTTGTTTTTACCAAAATCAACCAGAAGAATTAAGCGTTCTAAGGATGTGGCTTCTCAATCTGATTTTTGGGGTCTGTCTTCTGAAAGCCCTTTAGCTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAGGAATACCTGGAGGTTCATAGCAGATGCAGGAAACAGTTATGCACCAGTGCAACTAAATCATCTTGCAAACAACTGGAATTGTTGAGAAGTAATTCACATGATGATGATAGGAATATGGAAGACGGGGGTTGA 1152 0.4123 MFFDDLVLVLSLKPTGYPHSLPPATPPILFSFINSDMSSDSAKENASVVDSSVTEWRNDIGNSDDPESSGYKFKENINPTRADKGGHSHGQIGHPAGIGVEKCHNTKYFVIKSLNHQNIHLSIEKGIWATQIMNEPILQEAYHNSGSVILIFSVNMSGSFQGYAQMMTSIGRGRDNAWSEGTGKSNPWGRSFKVKWLCLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCKLLDGKNDTDGLLTSLSRDEFSLKGHYVSTPSSMGDEDCNFPPLHMLWPMPLPYSFLFLPKSTRRIKRSKDVASQSDFWGLSSESPLASTLTEDDFLDMSYEEYLEVHSRCRKQLCTSATKSSCKQLELLRSNSHDDDRNMEDGG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00254 383 Gene3D ph1033 like domains 99 253 - -
Gma11g00254 383 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 38 310 IPR045168 -
Gma11g00254 383 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 38 310 - -
Gma11g00254 383 Pfam YT521-B-like domain 183 241 IPR007275 GO:0003723
Gma11g00254 383 Pfam YT521-B-like domain 107 168 IPR007275 GO:0003723
Gma11g00254 383 ProSiteProfiles YTH domain profile. 106 241 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00254 Gma-Chr11 2019542 2024646 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00254 K20100 - gmx:100784130 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00254 11 2019542 2024646 Gma11g00254 11 2019542 2024646 ECH
Gma01g02152 01 56823521 56827878 Gma11g00254 11 2019542 2024646 GST