Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02152 ATGTCTTCTGATAGTGCAAAGGAAAATGCATCAGTAGTTGATTCATCAGTCACTGAAGGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCAGGTTACAAGTTTAATGAAAACATTAATACAACTAGGGCAGATAAAGGGGGACATTCTCATGGTCAGATAGGGCATCCTACAGGAATTGGAGTGGAAAAATGGCACAATATAAAATACTTTATCATTAAGAGTTTGAACCATCAAAACATCCATTTGTCAATTGAGAAAGGAATTTGGGCTACTCAAATCATGAATGAACCGATTCTAGAAGAAGCTTTTCATAATTCAGGCAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGTCCTCCATTGGAAGGGGGAGAGACAATGTTTGGAGTGAGGGAACTGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGATGTGTTTGAATGATTTGCCTTTCCACAAGACACTGCATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGACATTGGTCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATTATACAGATTGCCTGCCGACCAGTTTATCAAGGGATGAATTTTCTTTGAAAGGGCTTTATGCGAATACTCCAAGTTCAATGGGAGATGAAGACTGTAACTTTCCTCCACTGCATACATCGTGGTCAATGCCCTTGCCTTATTCTGCCTTGTTTTACCAAAATCAACCAGAAGTAAATAACTATCATTCAACAAACCAGAGAATCAGTGGGACAATGTTCACTGAAATATTGCCAACCACTTCTGAGTCATCACAAGTGTCAGGGATTAAACGTTCTAAGGATGTGGCTTCTCAATCTGATTTTTGGGGTCTATCTTCTGAAAGCCCTTTAGCTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGTCCATAGCAGATGCAAGAAACAGTTACGTACCAGTGCAACTAAACCATCTTGGAAACAACTGGAATTGTTGAGAAGTAATTCCCATGATGATGATAGGAATACAGAAGATGGGGTTGATAGAGACAGGAGCAACTCTCATGGGAGGATACATCAGTCATCTTTGCCATGGATATAA 1191 0.3988 MSSDSAKENASVVDSSVTEGRNDIGNSDDPESSGYKFNENINTTRADKGGHSHGQIGHPTGIGVEKWHNIKYFIIKSLNHQNIHLSIEKGIWATQIMNEPILEEAFHNSGSVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGTGKSNPWGRSFKVKWMCLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNYTDCLPTSLSRDEFSLKGLYANTPSSMGDEDCNFPPLHTSWSMPLPYSALFYQNQPEVNNYHSTNQRISGTMFTEILPTTSESSQVSGIKRSKDVASQSDFWGLSSESPLASTLTEDDFLDMSYEEYLEVHSRCKKQLRTSATKPSWKQLELLRSNSHDDDRNTEDGVDRDRSNSHGRIHQSSLPWI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02152 396 Gene3D ph1033 like domains 63 214 - -
Gma01g02152 396 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 7 312 - -
Gma01g02152 396 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 7 312 IPR045168 -
Gma01g02152 396 MobiDBLite consensus disorder prediction 362 386 - -
Gma01g02152 396 ProSiteProfiles YTH domain profile. 70 205 IPR007275 GO:0003723
Gma01g02152 396 Pfam YT521-B-like domain 71 205 IPR007275 GO:0003723
Gma01g02152 396 MobiDBLite consensus disorder prediction 1 49 - -
Gma01g02152 396 MobiDBLite consensus disorder prediction 361 396 - -
Gma01g02152 396 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02152 Gma-Chr1 56823521 56827878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02152 K20100 - gmx:100784130 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02152 01 56823521 56827878 Gma01g02152 01 56823521 56827878 ECH
Gma01g02152 01 56823521 56827878 Gma11g00254 11 2019542 2024646 GST