Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00190 ATGAACAACAGTTCGCCGGCGTTGACACTTCCGTCGGATACGTCGCCGTCAGTGGTGAACATGTTCAGAATCAACAAAGTTGCTGACCGTTTGGCTTGGATTGCTCAACCTGGCAACCGAGGCGAGCCTCACGAATTTTACAACCTCTGCCTCTCGCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGCGAAACTCCACCCAAGGCTCATGATCTGCCACTACTCGTGAAACAGATATGTCAACTAAAAAATGATGAATGTTCGCAAGCAGCTATGATGGTATTGCTGATATCTATAAAGAATGCTTGTGAAATTGGATGGTTCCAAACCAAAGAATCTGAAGAACTTGTTAGTATTGCTGATGAGATCGGAAAGGTCTACAGCAGTTTGGGGACTATAAATGTCAGACCTAGATCTTGCAGTACTGTAATATCAACAATAATGCAGAAATTCTATCCTAAATTTAAATTGGGTCCTATACTTGCATCGATTGAAGCCCAGGTGGTTCCTTGTGATTTGTCGATTTGGTTCTTATTTCTTGCTGAGAACATATTTAATATTATTTTACCTGCAATGCAGCCTGGATATGGAGCTTCTGCGGTTGATTTTCATATTACCAAGAGTGAAGTTCTTAAAGACAAAATTTTTTTATTGGTGGCACAAACAGATAACATTGAGACACCCGCATGCCTCATAAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTACTCAATAGGACTAATGTTCAAATGGATCCTGGAGCACAGGTGCCAACTAATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGTCAGTTCAATGGTCGTTATGTTGTACTTGTTGCCTATATGAGTGTTACACCTTTGCTTGAGGATCCAGTTCTTCAAGATTATCTTCAGCCTGCTGTTACATCTGTTGATTTAGATTCAGATATTATTGAGGGGGCTTCACGGATTTCACTTAATTGTCCAATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGACAACTTCATTAATATAAATTCAAAAAGGCCATCCTGGCGCTGCCCTAGATGCATTCAGAATGTCTGTTATGCTGATATTCGTCTTGACCGAAACATGATCCTGAAAAATGTTGGTGAGAACATTACGGAAGTGATTGTCTTTGCTAATGGATCATGGAAGGCAGTCTTGGAAAAGGATCATGATGTGGATAAGATGCAGAAGAAGGCACCCAATTGTGAAAAAGAACAAACTCAACCACAAGAATCTACTTGCCCTCCTAGTACTGTTGACCTCACTAAAGATGATGATGGTTTGGATACAGTGGGCTCTTGTGATATTGTAGAAAGAAAACCTCCCCCGGCATCTATTCATAGTCATTTTGTCTCCCCAAATTTAACTTCCTTGGGTATGAACTCTACTGGTGTTAATCAAAATGTTGCCGCTCAAACGGATGACTTTTGGACTGGAGTTTATATTGGCCGTAGTAGTTCTGATACCCCAACAGTTGGTAACTCCGAGCTACCTGTTCTGCCCGATACTGTTTCTCCTGCATTTAGTCAGGAATCTGCAGGTCGTGACAATAACCCTGTTGTTAATTCTGCCATGCATAATCAATTTTCGGGACCAAGCAACTTGCAGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCATCCTCAGCGCCAAGACATATTCATAGGACTCCGGTAGCTGTTCAGGCCCTCCCAGTTCAATCTCAGGCATTGGGACCACAGGAAAATTCAATAACTAATTTGAATAGTTCCTTGCTACCTAGCAATTCCTCTGCTGCTCCTCATATTTCTTTGTCCAACCCTGCCTCTGTAGATACTTTGAATGCCATACTAAGTGATACGGAAAGACAACAACATTTTTCTCGAACTCCAGTGAATCCGCCTCAGGTCTCAGGTGTAAATTCACCTGCATTTCAGCATCACACTGCAACCCAGAATCGGGTACCTCTTATAAATACGTCAGTGCCAACTCAACCGCAGAATCAATACAGAGCAAATGTGTTTTCTGAATTTAGAAATTCGCATCTGCAGCAAGCTTTGAATCGCTGGCCACCCCCATCAACATCATCTAATACCCAGTGGTCCCACATCCAGCAAAGTGTTCCACAATCTGGGAATTTTCAGGTAGCAGCCAGGGGTGGTGCACTGGCTGCCAGACAAGGTAGTTCCCATGCTAGGAATGTTCCGACAGCTGGAGCTACTACTCATAGGGGTATGGTTCCTAACCAACCTGCCAGATGGACGCAATCTGTTTCGGTTCAAAATCTAAGTACTGTAGCAGGCACACCTTTCCAGGGGTTAACAGGAGAGCAAAGAGGAAATACAGCACAGTCAGTTTCTAGGCCTGAAGAATTATTCAGTCCGCAATCAGAACAGAATTGGACTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCTTTACGATGAGTCTATTGCACAGCGAATAATTACGCCAACACAAGGTCAAAATTCAAAGCCACCAGGTCCACAACCCGTCCGACGGACTGGTATTTCCTCTTTGCAACCCGCCACGACCCAACTGGATGTGCTTATTGCAAACAATAGAAATGCAAATGCTCATAATCGTTCTTCCAGTAGATAA 2703 0.4288 MNNSSPALTLPSDTSPSVVNMFRINKVADRLAWIAQPGNRGEPHEFYNLCLSLSRGIDYALANGETPPKAHDLPLLVKQICQLKNDECSQAAMMVLLISIKNACEIGWFQTKESEELVSIADEIGKVYSSLGTINVRPRSCSTVISTIMQKFYPKFKLGPILASIEAQVVPCDLSIWFLFLAENIFNIILPAMQPGYGASAVDFHITKSEVLKDKIFLLVAQTDNIETPACLISPQQVNFLLNGKGVLNRTNVQMDPGAQVPTNVTGMLKFGTNLLQAVGQFNGRYVVLVAYMSVTPLLEDPVLQDYLQPAVTSVDLDSDIIEGASRISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFININSKRPSWRCPRCIQNVCYADIRLDRNMILKNVGENITEVIVFANGSWKAVLEKDHDVDKMQKKAPNCEKEQTQPQESTCPPSTVDLTKDDDGLDTVGSCDIVERKPPPASIHSHFVSPNLTSLGMNSTGVNQNVAAQTDDFWTGVYIGRSSSDTPTVGNSELPVLPDTVSPAFSQESAGRDNNPVVNSAMHNQFSGPSNLQMQMNHMNSVNEYGRSSSAPRHIHRTPVAVQALPVQSQALGPQENSITNLNSSLLPSNSSAAPHISLSNPASVDTLNAILSDTERQQHFSRTPVNPPQVSGVNSPAFQHHTATQNRVPLINTSVPTQPQNQYRANVFSEFRNSHLQQALNRWPPPSTSSNTQWSHIQQSVPQSGNFQVAARGGALAARQGSSHARNVPTAGATTHRGMVPNQPARWTQSVSVQNLSTVAGTPFQGLTGEQRGNTAQSVSRPEELFSPQSEQNWTPTGRMRGSLDLSQLYDESIAQRIITPTQGQNSKPPGPQPVRRTGISSLQPATTQLDVLIANNRNANAHNRSSSR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00190 900 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 24 167 - -
Gma11g00190 900 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 194 733 - -
Gma11g00190 900 CDD SP-RING_PIAS_like 329 374 - -
Gma11g00190 900 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 298 411 IPR013083 -
Gma11g00190 900 MobiDBLite consensus disorder prediction 744 772 - -
Gma11g00190 900 Pfam MIZ/SP-RING zinc finger 328 375 IPR004181 GO:0008270
Gma11g00190 900 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 24 167 - -
Gma11g00190 900 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 194 733 - -
Gma11g00190 900 MobiDBLite consensus disorder prediction 792 832 - -
Gma11g00190 900 ProSiteProfiles Zinc finger SP-RING-type profile. 317 400 IPR004181 GO:0008270
Gma11g00190 900 MobiDBLite consensus disorder prediction 429 446 - -
Gma11g00190 900 MobiDBLite consensus disorder prediction 425 452 - -
Gma11g00190 900 MobiDBLite consensus disorder prediction 849 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00190 Gma-Chr11 1491607 1499355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00190 K04706 - gmx:100784204 1691.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00190 11 1491607 1499355 Gma11g00190 11 1491607 1499355 ECH
Gma01g02225 01 57454331 57462340 Gma11g00190 11 1491607 1499355 GST