Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02225 ATGAACAACAGTTTGCCGGCGTTGACATCGGATACGTCGCCGTCAGTGGTGAACTTGTTCAGAATCAACAAAGTTGCGGACCGTTTGTCTTGGATTGCTCAACCTGGCAACCGAGGCGAGCCTTACGAATTTTACAACCTCTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGCGAAACTCCACCCAAGGCTCATGAACTGCCACTACTTGTGAAACAGATATGTCAACTAAAAAATGATGAATGTTCGCAAGCGGCTATGATGGTATTGATGATATCTATAAAGAATGCTTGTGAAATTGGATGGTTCCAAACAAAAGAATCTGAAGAACTTGTTACTATTGCTGATGAGATCAGAAAGGTCTACAGCAGTTTGGGGACTATTAATGTTGGACCTAGATCTTGCAGTACTGCAATATCAACAATAATGCAGAAGTTCTATCCTAAATTTAAATTGGGTCCCATACTTGCATCGATTGAAGCCCAACCTGGATATGGAGCTTCTGTGGTTGATTTTCATATTACCAAGAGTGAAGTTCTTAAAGACAAAATTTTTTTATTGGTGGCACAAACAGATAACATTGAGACATCAGCATGCCTCATAAATCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTACTCAATAGGACTAATGTTCAAATGGATCCTGGACCACAGGTGCCAACTAATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTATGTTGTACTTGTTGCCTATATGAGTTTTACACCTTTTCTTGAGGATCCAGTTCTTCAAGATTATCTTCAGCCTGCTGTTACATCTGTTGATTCAGATTCAGATATTATTGAGGGGGCTTCACAGATTTCACTTAATTGTCCAATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGACAACTTCATTAATATGAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCATTCAGAATGTCTGTTATGCTGATATTCGTCTTGACCGAAACATGGTTGAGGTCCTGAAAAATGTTGGTGAGAACATTACGGAAGTGATTGTTCTTGCTAATGGATCATGGAAGGCAGTCTTGGAAAAGGATCATGATGTGGATAAGATGCAGAAGAAGGCACGCAATTGTGAAAAGGAACAAACTCAACCACAAGAATCTACTTGCCCTCCTGGTACTGTTGACCTCACCAAAGATGATGATGGTTTGGATACAGTGGGCTCTTGTGATATTGTAGAAAGAAAACCTACCCCGGCATCTATTCATAGTCAGTTTGTCACCCCAAATTCAACTTCCTTGGGTATGAACTCTACTGGTGTTAATCAAAATGTTGCCACTCAAATAGATGACTTTTGGCCTGGAGTTTGTTTTGTCCGTAGTAGGTCTGATACCCCAACAGTTGGTAATTCTGAGCTACCTGTTCTGCCTGATACTGTTTCTCCTACATTTAGTCAGGAATCTGCTGGTCATGACAATAACCCTGTTGTTAACTCTGCCATGCATAATCAATTTTTGGGACCAAACAACTTGCAGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGCAGATCATCCTCAGCACCAAGACATATTCATAGGACTCCGGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATTGGGACCACAGCAAAATTCAATAACTAATTTGAATAGTTCCTTGCTACCTAGCAATTCCTCTGCTACTCCTCATATTTCTTTGTCCAACCCTACCTCTGTAGATACTTTGAATGCCATACTAAGTGATACGGAAAGACAACAACATTTTTCTCGAACCCCAATGAATCTGCCTCAGGTCTCAGGTGTAAATTCACCTGCATTTCAGCATCACACTGCAACACAGAATCGGGGACCACTTATAAATACGTCAGCACCAACTCAACCGCAGAACCAATACAGAGCAAATGCGTTTTCTGAATTTAGAAATTTGCATCTGCAGCAAGCTCTGAATCTCCGGCCACCCCCACCAAGATCATCTAATGCCCAATGGCCCCGCATCCAGCAAGGTGTTCCGCAATCTGGGAATTTTCAGGCGGCAGCCAGGGGTGCTTCAGTGGCTGCTGGACAAGGTAGTTCCCATGCTAGGAATGTTCCAACATCTGGAGCTACTACTCATAGCCATCAAGCTAGAGGTATGGTTGCTAACCAGCCTGCCAGGCCATCTGTTTTGGTTCAAAATCAAAGTACCGTAGCAGGCACCCCTTTCCACGGGTTAACAACAGAGCAAAGAGGAAATACAGCACAGTCAGTTTCTAGGCCTGAAGAATTATTCAGTTCGCAATCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCTTAACGATGAGTCTATTGCACAGCGAATAATTACGCCAACACAAGGTCAAAATTCAAGGCCACCAGGTCCACAACCCATTCGACGGACCGGTATTTCCTCTTTGCAACCCGCCACGACCCAACAGGATGTGCTTATTGCAAACAATAGAAATGCAAATGCTCATAATCGTTCTTCCAGTAGATAA 2631 0.4295 MNNSLPALTSDTSPSVVNLFRINKVADRLSWIAQPGNRGEPYEFYNLCLSLSRGIDYALANGETPPKAHELPLLVKQICQLKNDECSQAAMMVLMISIKNACEIGWFQTKESEELVTIADEIRKVYSSLGTINVGPRSCSTAISTIMQKFYPKFKLGPILASIEAQPGYGASVVDFHITKSEVLKDKIFLLVAQTDNIETSACLINPQQVNFLLNGKGVLNRTNVQMDPGPQVPTNVTGMLKFGTNLLQAVGQFNGRYVVLVAYMSFTPFLEDPVLQDYLQPAVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFINMNSKRPSWRCPHCIQNVCYADIRLDRNMVEVLKNVGENITEVIVLANGSWKAVLEKDHDVDKMQKKARNCEKEQTQPQESTCPPGTVDLTKDDDGLDTVGSCDIVERKPTPASIHSQFVTPNSTSLGMNSTGVNQNVATQIDDFWPGVCFVRSRSDTPTVGNSELPVLPDTVSPTFSQESAGHDNNPVVNSAMHNQFLGPNNLQMQMNHMNSVNEYGRSSSAPRHIHRTPVAVQALPVQSQALGPQQNSITNLNSSLLPSNSSATPHISLSNPTSVDTLNAILSDTERQQHFSRTPMNLPQVSGVNSPAFQHHTATQNRGPLINTSAPTQPQNQYRANAFSEFRNLHLQQALNLRPPPPRSSNAQWPRIQQGVPQSGNFQAAARGASVAAGQGSSHARNVPTSGATTHSHQARGMVANQPARPSVLVQNQSTVAGTPFHGLTTEQRGNTAQSVSRPEELFSSQSEQNWAPTGRMRGSLDLSQLNDESIAQRIITPTQGQNSRPPGPQPIRRTGISSLQPATTQQDVLIANNRNANAHNRSSSR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02225 876 MobiDBLite consensus disorder prediction 825 876 - -
Gma01g02225 876 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 22 738 - -
Gma01g02225 876 MobiDBLite consensus disorder prediction 707 744 - -
Gma01g02225 876 Pfam MIZ/SP-RING zinc finger 300 347 IPR004181 GO:0008270
Gma01g02225 876 CDD SP-RING_PIAS_like 301 346 - -
Gma01g02225 876 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 22 738 - -
Gma01g02225 876 ProSiteProfiles Zinc finger SP-RING-type profile. 289 370 IPR004181 GO:0008270
Gma01g02225 876 MobiDBLite consensus disorder prediction 768 808 - -
Gma01g02225 876 MobiDBLite consensus disorder prediction 725 744 - -
Gma01g02225 876 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 386 IPR013083 -
Gma01g02225 876 MobiDBLite consensus disorder prediction 401 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02225 Gma-Chr1 57454331 57462340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02225 K04706 - gmx:100780539 1704.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02225 01 57454331 57462340 Gma01g02225 01 57454331 57462340 ECH
Gma01g02225 01 57454331 57462340 Gma11g00190 11 1491607 1499355 GST